| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6097 |
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| Symbol | ubiE |
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| ID | 5674418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7422439 |
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| End bp | 7423203 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244949 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_001510347 |
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| Protein GI | 158317839 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0254883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTCGAG CAGGTCTGGA CAAGAAGCCC GACCAGGTGG CCGCGATGTT CGACCAGGTC
GCGCGGCGGT ACGACGTGAC GAACGCGGTG CTGTCGGCCG GCCTGGACCG CACCTGGCGG
ACCGCGACCG CGCGGGCCCT GGCCCTGGCG CCGGGCCTGC GGGTCCTCGA CGTCGCGGCC
GGGACGGCGA CGTCGTCCCG GGCCTTCGCC GCCGCCGGGG CCGATGTCGT GGCTTGCGAC
TTCTCTCTCG GCATGCTGGC CCAGGCCCGG CGCCGGCTCG CCGACGCGGC CGCGCGGGCG
GGCGCCGGGG CGGGAACGGG TGGGGCGGGA ACGGGTGGCG GCCGGGTGCT GCTGGCGGCT
GGTGACGGCC TGCGCCTGCC CTTCGCGGAC GGCTCCTTCG ACCGGGTCAC GATCTCCTTC
GGTCTGCGCA ACGTGGCCGA GGGCGACGTC TGCCTCGCCG AGTTGCTGCG GGTCACCCGG
CCGGGGGGCG TGCTGGCGGT CTGCGAGTTC AGCCGTCCGG TGTGGCGGCC GGTGCGCACG
GCGTACATGG AGTACCTGAT GCGCGCGCTG CCCGCGGTCG CGCGGGCGGT GAGCAGCAGC
CCGGACTCGT ACGTGTACCT GGCGGAGTCC ATCCGGGCCT GGCCGGGGCA GGCCGCGCTG
GCGGAGACGA TCCGCGCGGC CGGCTGGACA AGGGTGGGCT GGCGCAATCT CAGCGGCGGC
ATCGTCGCCG TCCACCGCGC CGTCCGCCCC GGCGGAGACG ACTGA
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| Protein sequence | MSRAGLDKKP DQVAAMFDQV ARRYDVTNAV LSAGLDRTWR TATARALALA PGLRVLDVAA
GTATSSRAFA AAGADVVACD FSLGMLAQAR RRLADAAARA GAGAGTGGAG TGGGRVLLAA
GDGLRLPFAD GSFDRVTISF GLRNVAEGDV CLAELLRVTR PGGVLAVCEF SRPVWRPVRT
AYMEYLMRAL PAVARAVSSS PDSYVYLAES IRAWPGQAAL AETIRAAGWT RVGWRNLSGG
IVAVHRAVRP GGDD
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