Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6096 |
Symbol | |
ID | 5674417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7420988 |
End bp | 7421704 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641244948 |
Product | carboxymethylenebutenolidase |
Protein accession | YP_001510346 |
Protein GI | 158317838 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0559809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAG AAACAGTCGT TCTCACCACC GCCGAAGGTC CGACGCCCGC GGTCATAGCG GAGCCCCGGT GGACCGCCCG CGGCGGCGTC CTCGTCGTGC ACGAGGTGTT CGGGCTCACC GACCACGTGA CCGACGTCTG CCGCAGGTTC GCGGACGCCG GCTGGCGGGC CGTCGCCCCG GATCTGTACC ACCGGCAGGG CTCCCCCGTC TTCGACTACA CCGACTCGGC GGCGGCGGTC TCGCTGCGCG GCCGGCTGGC CGGCGACGAC ATCCTCGACG ACCTGGACTC CGGGCTGATG GTGCTCGCCG AGTCGGGGAC GGCGGTCGAC CGCTGCGCCG TCGTCGGGTT CTGCATGGGC GGCGGCATCG CCTTCCACGC GGCCGTGCGG CGCCCGCTCG GCGCCGCCGT CACGTTCTAC GGCGGCGGCA TCGAGGACGG TCGGTTCGGC GAGCCCTCGC AGCTCGACCT CGCCGCCGCC CTGCAGACCC CCTGGCTGGG GCTGTACGGG GATCTCGACC GCTCGATCCC GGTGGAGCAG GTGGAGCACC TGCGGGCCGC GGCCGCCCGC GCCGACGTCG ACACCGAGGT CGTCCGCTAC CCGGGGGTGG GCCACGCCTT CTACAACGAC GCGCGCCCCG ACTCCTACGA CGCCGCCGCG GCCCGCGACG CCTGGGCGCG CGCGCTGACC TGGATGGACG CACACGTCCC GAAGTGA
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Protein sequence | MTSETVVLTT AEGPTPAVIA EPRWTARGGV LVVHEVFGLT DHVTDVCRRF ADAGWRAVAP DLYHRQGSPV FDYTDSAAAV SLRGRLAGDD ILDDLDSGLM VLAESGTAVD RCAVVGFCMG GGIAFHAAVR RPLGAAVTFY GGGIEDGRFG EPSQLDLAAA LQTPWLGLYG DLDRSIPVEQ VEHLRAAAAR ADVDTEVVRY PGVGHAFYND ARPDSYDAAA ARDAWARALT WMDAHVPK
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