| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6087 |
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| Symbol | |
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| ID | 5674408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7409281 |
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| End bp | 7410669 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641244939 |
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| Product | NADH dehydrogenase subunit H |
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| Protein accession | YP_001510337 |
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| Protein GI | 158317829 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0085721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0109132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGA CCTCGACGCT CCTGCTCGCC GCGAACGTCG GCGACCCGGA CATGTCCGTC
CTCACCGACG ACCCGTTCTG GCTCATCCTG ATCAAGGCTG TCGCGGTCTT CGCGTTCCTG
CTGGTGATGA CGCTGTTCTC GATCGTCTTC GAGCGCAAGG TCGTCGCGAA GATGCAGCAG
CGGGTCGGGC CGAACCGGCA CGGCCCGCGC GGCTGGCTGC AGAGCCTCGC CGACGGCGTG
AAGCTCATGC TCAAGGAAGA CATCATCCCG ACGCTGGCCG ACAAGCCGAT CTTCATCCTG
GCTCCGGTCA TCTCGGCGGT GCCGGCCATC CTGGCCTTCG CCTGCATCCC GTTCGGGCCG
GAGGTGTCGA TCTTCGGTGA ACGCACGACG CTCCAGCTCG CCGACCTGCC GGTCAGCGTG
CTGTACCTGC TGGCGGCGGC GTCGCTGGGC GTGTACGGAC TGATCCTCGC CGGCTGGTCC
AGCGGCTCGA CCTACCCGCT GCTGGGCTCG CTGCGCTCGG CCGCGCAGAT CATCTCCTAC
GAAGTCGCGA TGGGCCTGGC CTTCGTCGCG GTCTTCGTCT ACGCGGGAAC ACTGTCGACC
GCGGGCATCG TGCAGAGCCA GCACGACTGG TGGTACATCG CGCTGCTGCC GTCGTTCATC
CTCTACTGCA TCGCGATGGT CGGTGAGACG AACCGGACGC CGTTCGACCT CCCCGAGGCC
GAGGGCGAGC TGGTCGGCGG GTTCCACACC GAGTACAGCT CGATCAAGTT CGCGTTCTTC
TTCCTCGCCG AGTACATCAA CATGGTCACC GTCTCGGCGA TCGCGACCAC ACTGTTCCTC
GGAGGCTGGC AGCCGCCGCC GATCCCGGGC CTGTCCGGGC TGGACCACGG CTGGTACCCG
CTGATCTGGT TCGTCATCAA GCTGCTGCTG TTCATCTTCG TGTTCATCTG GCTGCGGGGC
ACGCTGCCGC GGCTGCGCTA CGACCAGTTC ATGGCCTTCG GCTGGAAGGT CCTGATCCCG
GTCGGCCTGG TGTGGGTGCT CGCGGTCGCG ACCTTCCGCG CCTACCAGGA GCACGTGAGT
GACCGGACGC CATGGCTGAT CGGCTTCGGG GTCGTGGTGG GCGTCCTGCT CGTGGTTGCG
ATCATCGACC CGGGCGCGGC GAGGGCCCAG CGCGAGCAGG AGGAGGCCGA GCGGGAACGC
GCCGAATCGG CCCCGAGCCT GGACAGGATT CCCTGGCCGC CGCCGTCCGA CGGCGCGACG
AGGGCACTGG CCGGCCGCAC TGCGGCTGGC AGCACTGCAG CCGGCAGCGG CGCGGCCGGC
TCCGCCGGCG GCGACAAGGG AAACACCACC GTCATCCCCG CGGGCTCCGG CCCGCGACAG
GAGAGCTGA
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| Protein sequence | MTGTSTLLLA ANVGDPDMSV LTDDPFWLIL IKAVAVFAFL LVMTLFSIVF ERKVVAKMQQ
RVGPNRHGPR GWLQSLADGV KLMLKEDIIP TLADKPIFIL APVISAVPAI LAFACIPFGP
EVSIFGERTT LQLADLPVSV LYLLAAASLG VYGLILAGWS SGSTYPLLGS LRSAAQIISY
EVAMGLAFVA VFVYAGTLST AGIVQSQHDW WYIALLPSFI LYCIAMVGET NRTPFDLPEA
EGELVGGFHT EYSSIKFAFF FLAEYINMVT VSAIATTLFL GGWQPPPIPG LSGLDHGWYP
LIWFVIKLLL FIFVFIWLRG TLPRLRYDQF MAFGWKVLIP VGLVWVLAVA TFRAYQEHVS
DRTPWLIGFG VVVGVLLVVA IIDPGAARAQ REQEEAERER AESAPSLDRI PWPPPSDGAT
RALAGRTAAG STAAGSGAAG SAGGDKGNTT VIPAGSGPRQ ES
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