| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6082 |
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| Symbol | |
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| ID | 5674403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7403644 |
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| End bp | 7405203 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641244934 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_001510332 |
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| Protein GI | 158317824 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.596347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0617522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACAG CCCCCTGGCT GACGATCATG CTGATCGTCC CCGCGGTCGG TTCGCTGGTC
GTCGCGTCGC TGCCGCGCCG GCACGGCACG CTCGCCAAGC AACTCGCGCT CGTGGTATCG
CTGGCGGTTC TGGTGCTCGC GGTGCTGGCC ACCGCCGCCT ACGACCCGGA CAAGGCCGGC
TTCCAGTTCG GCCAGTCCTA TGACTGGATC AAGGAGTTCG GCGTCTCCTA CTCGGTGGGC
GCCGACGGCA TCTCGCTGGT GCTGATGCTG CTCGCCGCGC TGCTCGTCCC GGTGGTCGTG
CTGTCCTCCT GGGACGAGGC GGAAGAGGGG CGGCGTTCCG TCCCCGCGTT CTTCGCGCTG
CTGCTGGCGC TGGAGACGGG CATGGTCGGG GTGTTCGCCG CCACCGACGT GTTCCTCTTC
TATGTCTTCT TCGAGGCCAT GCTCATCCCG ATGTACTTCC TCATCGGGAG CTACGGGCCG
GTCGAGGAGA AGGCACAGCG CTCCTACGCG GCGGTGAAGT TCCTGCTCTA CAGCCTGTTC
GGCGGGCTGC TGATGCTCGC CGCGGTGATC GGCCTGTACG TGGTCTCCGC CGACCAGCTC
GGCACGGGCA CGTTCGACTT CGCCACCCTG CGCCAGCTGG AGATCACCCC GGGCGTGCAG
AAGCTGCTCT TCCTCGGCTT CTTCATCGCC TTCGCCATCA AGGCGCCGCT GTTTCCCTTC
CACACCTGGC TGCCCGACGC CGGCGCGCAG TCGCCGACCG GCGGCGCCGT CCTGCTCGTC
GGGGTGCTGG ACAAGGTCGG CACCTTCGGC CTGATCCGGT ACTGCATCCC GCTGTTCCCG
GACGCCGCCG AGTACTTCGC GCCGATGGTG CTGGCCCTGG CGGTGATCGG CATCTTCTAC
GGCGCCCTGC TGGCCATCGG CCAGCGGGAC ATGAAACGGC TGGTCGCCTA CACCTCGCTG
GCGCACTTCG GGTTCATAGC GCTGGGGACC TTCGCCTTCA CCTCGCAGGC CGGCACGGGC
GCCGTGCTCT ACATGGTCAA CCACGGCCTG TCGACGGGGC TGCTGTTCGT GGTGGTCGGC
TTCCTGGTGG CCCGCCGGGG CAGCCGGGAC GTCAGCGCCT ACGGCGGCAT GGCCCAGGTG
ACGCCGATCC TCGCCGGGGT CTTCCTGATC GCCGGCCTGT CCTCGCTGGC CCTGCCGGGT
ACGAACAGCT TCGTCAGCGA GTTCCTGGTG CTGGTCGGCA CGTTCACCGA GTACCGGGCG
CTGGCGATCG TCGCGACCTG CGGGATCGTG CTCGCCGCGA TCTACATCCT GTACCTGTAC
CAGCGCACGA TGACCGGTCC GGTCAAGGAC GAGAAGATGC GTCTCATCAA GGACCTCAGC
GTGCGGGAGC GGGTGGTGGT CGCGCCGATG GTCGCGCTGA TCATCGGGCT CGGGGTGTAC
CCCAAGCCGC TGCTCGACAT CATCACGCCC ACGGTGACCG CCACGTTCGC GGACATCGGG
AAGTCTGACC CGGCGCCGAC GGCCCCGGTG GCCGCGCCGG AATCCGGAGG CCATTCGTGA
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| Protein sequence | MSTAPWLTIM LIVPAVGSLV VASLPRRHGT LAKQLALVVS LAVLVLAVLA TAAYDPDKAG
FQFGQSYDWI KEFGVSYSVG ADGISLVLML LAALLVPVVV LSSWDEAEEG RRSVPAFFAL
LLALETGMVG VFAATDVFLF YVFFEAMLIP MYFLIGSYGP VEEKAQRSYA AVKFLLYSLF
GGLLMLAAVI GLYVVSADQL GTGTFDFATL RQLEITPGVQ KLLFLGFFIA FAIKAPLFPF
HTWLPDAGAQ SPTGGAVLLV GVLDKVGTFG LIRYCIPLFP DAAEYFAPMV LALAVIGIFY
GALLAIGQRD MKRLVAYTSL AHFGFIALGT FAFTSQAGTG AVLYMVNHGL STGLLFVVVG
FLVARRGSRD VSAYGGMAQV TPILAGVFLI AGLSSLALPG TNSFVSEFLV LVGTFTEYRA
LAIVATCGIV LAAIYILYLY QRTMTGPVKD EKMRLIKDLS VRERVVVAPM VALIIGLGVY
PKPLLDIITP TVTATFADIG KSDPAPTAPV AAPESGGHS
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