| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6080 |
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| Symbol | |
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| ID | 5674401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7401046 |
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| End bp | 7402062 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244932 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001510330 |
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| Protein GI | 158317822 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.176249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTA TCGGGCTGGA AGTGATGGGG ATCAGGGCCG ACCCTGATCT CGAGAAGTCG
ATGCGGGTCG GGCTCGCCGC GGTCGAGGAG ATGCTGCGCG GATCCGTCCG CAGCGAGTTC
TCCTTCGTGA CCGAGGCGTC CCGGCACCTC GTCGACGCGG GCGGCAAGCG GTTCCGACCT
ATGGTCGTAC TGCTTGCCGC CCAGTTCGCC GATCCGGACG CGGCCGGTGT CGTGCCGGCG
GCCGTGGCGA TCGAGCTGAC CCATCTGTCG ACGCTGTACC ACGACGACGT GATGGACGAG
GCCCCGCTGC GCCGCGGTGC CGCGTCCGCG AACGCCCGGT GGACGAACAC GGTCGCGATC
CTCACCGGCG ACTTCCTGTT CGCCCGCGCG TCCGAGATCA CGGCCGACCT GGGGCCGGAG
GCGACCCGCA TCCTGGCACG CACGATCGCG ACCCTCTGCG AGGGCCAGAT CCGCGAGACC
GTCGGGGTCG GGCCGGGGCA GGACCCGATC GAGCACTACC TGCGGGTCAT CACGGAGAAG
ACGGCTTCGC TGATCGCCAC GTCCGCCCGC CTGGGCGCCA TGCTCGCCGG CGCCGACCCG
GTCACGACCG ACGTCCTGGC CGCGTTCGGG GAGCGCTTCG GGGTGGCCTT CCAGCTCTCC
GACGACCTCA TCGACGTGGC GTCACCGAGC GAGGACTCCG GCAAGACACC CGGGACGGAC
CTGCGCGAGG GCATCCCGAC GCTGCCGGTG CTCTATGCCC TGCAGGGCGA GGACGCGGCG
GCCCGCCGGC TGCGCGACCT GCTCGGGGTG AACCCGCGCA CGGAGGCCGG GGTCACCGAG
TCCGGGGTCG TCGAGGCGTT GGAGCTGCTG CGCGAGCATC CCGCGATGGA CCGGGCCCGC
GCCGAGCTCA TCCGCTGGTC GAGCGAGGCC CGCGAGTGCC TGGCGCCGCT GCCCGACGGC
TCGGCCAAGA CCGCGCTGGA GTCGCTGGCC GACTTCGTCA TCGACCGCAC GAGCTAG
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| Protein sequence | MSAIGLEVMG IRADPDLEKS MRVGLAAVEE MLRGSVRSEF SFVTEASRHL VDAGGKRFRP
MVVLLAAQFA DPDAAGVVPA AVAIELTHLS TLYHDDVMDE APLRRGAASA NARWTNTVAI
LTGDFLFARA SEITADLGPE ATRILARTIA TLCEGQIRET VGVGPGQDPI EHYLRVITEK
TASLIATSAR LGAMLAGADP VTTDVLAAFG ERFGVAFQLS DDLIDVASPS EDSGKTPGTD
LREGIPTLPV LYALQGEDAA ARRLRDLLGV NPRTEAGVTE SGVVEALELL REHPAMDRAR
AELIRWSSEA RECLAPLPDG SAKTALESLA DFVIDRTS
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