Gene Franean1_6075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6075 
Symbol 
ID5674396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7392917 
End bp7393789 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID641244927 
Productheat shock protein HtpX 
Protein accessionYP_001510325 
Protein GI158317817 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.143037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCATC GCAGTCTCAA CGGGCTGAAG ACGGCGCTTC TCCTCGGCGT TCTCTCGGCC 
GCGATCGTGT GGATCGGGTC GCTCTTCGGC ACGAGCGGCC TCGTCATCGC CGTCGTTCTC
GCGCTCGCGA TGAACGGATT CTCCTACTTC TACTCGGATC GGATCGCCCT GCGGGCGATG
CGGGCGTATC CGGTGAGCCA GGTTCAGCAG CCCCGGCTCT ACGCGATCGT CCAGGAGCTC
GCCACCCGGG CGCGCATGCC GATGCCCAAG CTGTACCTGA GCCCCACATC GTCACCGAAC
GCCTTCGCGA CCGGGCGAAA CCCCCGTAAC GCGGCCGTGT GCTGCACCGA GGGAATCATG
GAGATCATGG ATGACCGTGA GCTCCGTGGT GTCCTCGGGC ATGAGCTGAG CCATGTCTAC
AACCGCGACA TCCTCATCGC CTCGGTTGCG GGCGCGCTCG CGGGCATCAT CGTTTATCTG
GCAAACATGC TGCAGTGGTT TGCCATTTTC GGCGGCGGTC GCGACGAGGA CGGCCCCGGG
GTACTGGAGA TGCTGGCCCT CATCGTCGTC GGCCCGATCG CCGCCACGAT CATCCAGCTG
GCGATCAGCC GGGCCCGCGA GTACCAGGCG GACGAATCCG GGTCGACCCT CACCGGCGAC
CCGCTCGGCC TGGCCAGCGC CCTGCGCAAG TTGGATGCCG GCACGGCCGC CAGGCCGCTG
CCAGCCAACT CGCGGCTGGG CCCGGCCGCC GCGCTGATGA TCGCGAACCC GTTCCGCGGC
GGCGGCATCG GCCGGTTCTT CTCGACCCAC CCGCCGATCG CCGAGCGGAT CGCCCGGTTG
GAGCAGCGCG CCAGGATGAA CCCGTATCGG TAA
 
Protein sequence
MLHRSLNGLK TALLLGVLSA AIVWIGSLFG TSGLVIAVVL ALAMNGFSYF YSDRIALRAM 
RAYPVSQVQQ PRLYAIVQEL ATRARMPMPK LYLSPTSSPN AFATGRNPRN AAVCCTEGIM
EIMDDRELRG VLGHELSHVY NRDILIASVA GALAGIIVYL ANMLQWFAIF GGGRDEDGPG
VLEMLALIVV GPIAATIIQL AISRAREYQA DESGSTLTGD PLGLASALRK LDAGTAARPL
PANSRLGPAA ALMIANPFRG GGIGRFFSTH PPIAERIARL EQRARMNPYR