Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6075 |
Symbol | |
ID | 5674396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7392917 |
End bp | 7393789 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641244927 |
Product | heat shock protein HtpX |
Protein accession | YP_001510325 |
Protein GI | 158317817 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.143037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCATC GCAGTCTCAA CGGGCTGAAG ACGGCGCTTC TCCTCGGCGT TCTCTCGGCC GCGATCGTGT GGATCGGGTC GCTCTTCGGC ACGAGCGGCC TCGTCATCGC CGTCGTTCTC GCGCTCGCGA TGAACGGATT CTCCTACTTC TACTCGGATC GGATCGCCCT GCGGGCGATG CGGGCGTATC CGGTGAGCCA GGTTCAGCAG CCCCGGCTCT ACGCGATCGT CCAGGAGCTC GCCACCCGGG CGCGCATGCC GATGCCCAAG CTGTACCTGA GCCCCACATC GTCACCGAAC GCCTTCGCGA CCGGGCGAAA CCCCCGTAAC GCGGCCGTGT GCTGCACCGA GGGAATCATG GAGATCATGG ATGACCGTGA GCTCCGTGGT GTCCTCGGGC ATGAGCTGAG CCATGTCTAC AACCGCGACA TCCTCATCGC CTCGGTTGCG GGCGCGCTCG CGGGCATCAT CGTTTATCTG GCAAACATGC TGCAGTGGTT TGCCATTTTC GGCGGCGGTC GCGACGAGGA CGGCCCCGGG GTACTGGAGA TGCTGGCCCT CATCGTCGTC GGCCCGATCG CCGCCACGAT CATCCAGCTG GCGATCAGCC GGGCCCGCGA GTACCAGGCG GACGAATCCG GGTCGACCCT CACCGGCGAC CCGCTCGGCC TGGCCAGCGC CCTGCGCAAG TTGGATGCCG GCACGGCCGC CAGGCCGCTG CCAGCCAACT CGCGGCTGGG CCCGGCCGCC GCGCTGATGA TCGCGAACCC GTTCCGCGGC GGCGGCATCG GCCGGTTCTT CTCGACCCAC CCGCCGATCG CCGAGCGGAT CGCCCGGTTG GAGCAGCGCG CCAGGATGAA CCCGTATCGG TAA
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Protein sequence | MLHRSLNGLK TALLLGVLSA AIVWIGSLFG TSGLVIAVVL ALAMNGFSYF YSDRIALRAM RAYPVSQVQQ PRLYAIVQEL ATRARMPMPK LYLSPTSSPN AFATGRNPRN AAVCCTEGIM EIMDDRELRG VLGHELSHVY NRDILIASVA GALAGIIVYL ANMLQWFAIF GGGRDEDGPG VLEMLALIVV GPIAATIIQL AISRAREYQA DESGSTLTGD PLGLASALRK LDAGTAARPL PANSRLGPAA ALMIANPFRG GGIGRFFSTH PPIAERIARL EQRARMNPYR
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