Gene Franean1_6072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6072 
Symbol 
ID5674393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7390016 
End bp7390384 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content72% 
IMG OID641244923 
Productisomerase 
Protein accessionYP_001510322 
Protein GI158317814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.548217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACC TCGAGACCCT GGCCCTGAAC TACATCGCCG CGTGGAACGA GACCGACCCC 
GCTCTGCGGA GGGCTGCCGT GGCGAAGGCC CTGGCCCCCG GGGCCCGCTA TGTCGACCCG
ATCGCCACGG CCGAGGGCCA CGACGCCATC GACACGATGA TCGGAGCGGT GCAGGGACAG
TTCCCCGGCC TGACGATGAC CATGCTGGGG CCGGTCGACG CCCACCACGC CCAGGCCCGC
TTCACCTGGG GCCTCGGCCA GCCCGGCGCC GAACCCCTCG TCGTCGGGTT CGACGTGATC
GAACGCGGCA CCGACGGCCG CATCACCCAG GTGCTCGGCT TCCTCGACAA GGTGCCCGCC
GGGGCCTGA
 
Protein sequence
MDDLETLALN YIAAWNETDP ALRRAAVAKA LAPGARYVDP IATAEGHDAI DTMIGAVQGQ 
FPGLTMTMLG PVDAHHAQAR FTWGLGQPGA EPLVVGFDVI ERGTDGRITQ VLGFLDKVPA
GA