Gene Franean1_6066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6066 
Symbol 
ID5674387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7384216 
End bp7384671 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID641244915 
Producthypothetical protein 
Protein accessionYP_001510316 
Protein GI158317808 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.421262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.550336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTGA ACCAGGACTT TGTCGGACGT AGTTACACCT CCGACGTCCC GTTCCAGGTG 
GGACGTGAGC ACATCCGCCA GTTCGCGCGC GCCATCGGCG ACGGCAACCC GCTCTTCCGC
GACGTGGAGG CGGCGAAGGC CGCCGGTCAC GCCGATCTGG TCGCCCCGCC GACCTTCCTG
GTCACGGCGA TCCCGGGCGA CCTCGGCCTG CCGACCAACG ATCCCGCTCT CGGCCTGGAC
TACTCCCTCG TCGTCCACGG TGACCAGCGG TTCACCCTGC ACCGCCCGGT TGTCGCGGGC
GACGAGCTCG TGGTGCGCTC GACGCTGGCG TCCATCCGCT CGGTCGGCCG CAACGAGGTG
CTGGTGACGT CCTACGAGTT CACGACGACG AGTGGCGAGC TGGTCGCGGA GGGAACGTGC
AGCCTGGTCT CCCGCGGCAC CGCGCCGCCT CGTTGA
 
Protein sequence
MPLNQDFVGR SYTSDVPFQV GREHIRQFAR AIGDGNPLFR DVEAAKAAGH ADLVAPPTFL 
VTAIPGDLGL PTNDPALGLD YSLVVHGDQR FTLHRPVVAG DELVVRSTLA SIRSVGRNEV
LVTSYEFTTT SGELVAEGTC SLVSRGTAPP R