Gene Franean1_6065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6065 
Symbol 
ID5674386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7383658 
End bp7384086 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content69% 
IMG OID641244914 
Productdehydratase 
Protein accessionYP_001510315 
Protein GI158317807 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.801232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA CCGTCACCTA TGACGCCGTC GACGTCGGTA CCGAGATCGG TGACCGGGTC 
TTCCCGCTGC GGCGAGCCGA TCTGGTGCGC TACGCCGGCG CGTCGGGCGA TTTCAACCCG
ATCCACTGGA ACGAGCGGGT GGCCGCCGAG GCCGGGCTCC CCGGTGTGCT CGCGCACGGC
ATGCTGACGA TGGCCACGGC GGGCCGTCTC GTCACCGACT GGGTCGGCGA CCCGGCGGCC
GTCGTCGAGT ACGGCGTGAA GTTCTCCTCA CCCGTGGTCG TGCCCGACGA CGACGAGGGC
GCGCAGATCT CTGTGCGGGG CGTTGTGGAG AAAAAGCTCG ACGGCGGGAG GGTCGTGGTT
AACCTCACAG TCCGACACGA GGGTGCCAAG GTCCTCATGG CGGCGCGGGC GACCGTCCAG
CTCGCCTGA
 
Protein sequence
MPTTVTYDAV DVGTEIGDRV FPLRRADLVR YAGASGDFNP IHWNERVAAE AGLPGVLAHG 
MLTMATAGRL VTDWVGDPAA VVEYGVKFSS PVVVPDDDEG AQISVRGVVE KKLDGGRVVV
NLTVRHEGAK VLMAARATVQ LA