Gene Franean1_6063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6063 
Symbol 
ID5674384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7381594 
End bp7381857 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content67% 
IMG OID641244911 
Productpreprotein translocase, SecE subunit 
Protein accessionYP_001510313 
Protein GI158317805 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.962239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCG ATACGCGTGA CGCGGCACCG CGGGCCGGTA GGTCCGCGCG GGCCGACCGT 
CGACGGTCGC CGTTCTCGAT TGTCCGCAGG ATTCGTCAGT TCGTCCGCGA GGTCATCGCG
GAGCTTCGCA AGGTCGTCTA CCCGGGCCGG AGCGAGCTGA TCACCTACGT GGTCGTCGTG
CTTGTCTTCG TCACGGTGAT GACGGCCTTC GTGGCTAGCC TCGACTTCGG CCTGACGAAG
GCGGTCCTCG CGGTCTTCGG CTGA
 
Protein sequence
MATDTRDAAP RAGRSARADR RRSPFSIVRR IRQFVREVIA ELRKVVYPGR SELITYVVVV 
LVFVTVMTAF VASLDFGLTK AVLAVFG