| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6060 |
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| Symbol | rplA |
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| ID | 5674381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7379136 |
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| End bp | 7379849 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641244908 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001510310 |
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| Protein GI | 158317802 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.166987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA GCAAGGCGTA CCGCGCCGCG GCCGAGAAGA TCGACGCGAC CGCCCTCTAC
AGCCCCCTCG ACGCGGCGCG GCTGGCCCGG GAGACGTCGT CCACGAAGTA CGACGCCACC
GTCGAGGTCG CCATCCGTCT CGGCGTCGAC CCGCGCAAGG CCGACCAGAT GGTGCGTGGC
ACGGTCAACC TGCCGCACGG CACCGGCAAG TCGCCGCGGG TCGCGGTGTT CGCCGCCGGT
GAGAAGGCCG CCGAGGCCAC CGCCGCGGGC GCGGACGTCG TCGGCAGCGA CGACCTGGTG
GCCCGCATCC AGGAGGGCTT CCTCGACTTC GACGCCACGG TCGCGACGCC CGACCAGATG
GCCAAGGTCG GCCGGATCGC CCGCATCCTC GGCCCGCGCG GGCTCATGCC GAACCCGAAG
ACCGGCACCG TCACCCTGGA CGTGGCCAAG GTCGTCGGCG ACATCAAGGG CGGTAAGATC
AACTTCCGGG TCGACAAGCA GGGCAACCTG CACATCGTTA TCGGCAAGGT GAGCTTCTCC
GAGGCCCAGC TCATCGAGAA CTACACCGTC GCCCTCGATG AGATCGTCCG GGTGAAGCCG
TCGGCGGCCA AGGGCCGGTA CCTCAAGAAG GTCACCTTCG CCACGACGAT GGGCCCCGGC
ATCCCCGTGG ACCCGAACCG GACCCGGAAC CTTCTCGAGG ACGCCCCGGC CTGA
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| Protein sequence | MKRSKAYRAA AEKIDATALY SPLDAARLAR ETSSTKYDAT VEVAIRLGVD PRKADQMVRG
TVNLPHGTGK SPRVAVFAAG EKAAEATAAG ADVVGSDDLV ARIQEGFLDF DATVATPDQM
AKVGRIARIL GPRGLMPNPK TGTVTLDVAK VVGDIKGGKI NFRVDKQGNL HIVIGKVSFS
EAQLIENYTV ALDEIVRVKP SAAKGRYLKK VTFATTMGPG IPVDPNRTRN LLEDAPA
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