| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6055 |
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| Symbol | |
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| ID | 5674376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7367721 |
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| End bp | 7368614 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244903 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_001510305 |
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| Protein GI | 158317797 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.245344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA CCAGACCGCC CAGCCAGGGC ACCGCGCCGG ACCAGCCGTC CCCGGCCGAC
CAGACACCAG AAGACACGCT GCCGCAGACA CTCACCCTGT CGACGGGCCC CACGCTGCCA
TCAGAAGCTG CGACGCCGGG AATGGAAGCC GCGCCGGCGC AAGAAGCCGC CCCCGCGCAG
GAAGCCACGG ACAGGCCCGT AGCCGCCCCG GCACCGGAGG CCGCCGACAC GCCTGTAGCC
GGGCCGGCGG CGCTGAGGTC ACCGAAGCCG CCGCGGCGGC CCCGACCGGA CCGCGCGGAG
CTTCTCGCGG CCTACGGGAA GACCGTTCCG GACCTCGTCG GTCCGGAGAC CCGGGTGCTG
CTGTGCGGTA TCAATCCGTC CCTGGAGTCC GGCGCCACCG GATTCCATTT CGGGACGCCC
AGCAATCGGC TCTGGCCGGT CCTGCACTTC GCCGGGTTCA CCGGGCGCCG GCTGCATCCG
TCCGAGACCG AGCACCTACG CGCCCGGGGC ATCGGAATCA CGAATCTGGT GCACCGCTCG
ACCGCTCGCG CCGATGAGAT CGCTGACGAC GAAATCAGGG CCGGTGTGCC GGTACTCATC
GAGCTTGTCG AACGGATCCG CCCGGAATGG GTCGCCTTTC TCGGGCTCGC CGCGTACCGC
ATCGGCTTCG GGCGGCGGAC GGCGAAGGTC GGTCGACAGC CGGAGCGCAT CGGTCCCGCC
GGGGTGTGGC TGCTACCGAA CCCCAGTGGG CTGAACGCGC ACTACCAGCT ACCCGACCTT
GTCCGGGTCT ACGGCGAACT GCGCGAGGCC GCCTTCGGGC CTGTCACGGC CACCACGCCG
GCAGCGGGCC CGACCGCGGG TCCCGGACTC AGGTCCGGGC ACGGCGGCGG CTGA
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| Protein sequence | MASTRPPSQG TAPDQPSPAD QTPEDTLPQT LTLSTGPTLP SEAATPGMEA APAQEAAPAQ
EATDRPVAAP APEAADTPVA GPAALRSPKP PRRPRPDRAE LLAAYGKTVP DLVGPETRVL
LCGINPSLES GATGFHFGTP SNRLWPVLHF AGFTGRRLHP SETEHLRARG IGITNLVHRS
TARADEIADD EIRAGVPVLI ELVERIRPEW VAFLGLAAYR IGFGRRTAKV GRQPERIGPA
GVWLLPNPSG LNAHYQLPDL VRVYGELREA AFGPVTATTP AAGPTAGPGL RSGHGGG
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