| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6025 |
|---|
| Symbol | rpsM |
|---|
| ID | 5674346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7347298 |
|---|
| End bp | 7347678 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641244873 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | YP_001510275 |
|---|
| Protein GI | 158317767 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0915595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCC TTTCCGGCGT CGACCTTCCC CGCGAGAAGC GGGTTGAGAT CGCGCTGACC
TACATCTTCG GGATCGGTCG CAGCCGCTCC CGGGACACCC TCGCCGCAAC CGGGGTCAAC
CCGGACACCC GGGTCCGTGA CCTCACCGAC GACGAGGTCC AGAAGCTTCG GGAGTGGATC
GACGCGAACT ACCGCGTCGA GGGCGATCTC AACCGTGAGA TCAAGCAGGA CATTCGCCGC
AAGATGGAGA TCGGCTGCTA CCAGGGTCTC CGTCACCGCC GCAACCTTCC CGTCCACGGC
CAGCGCACGC ACACCAACGC GCGTACCCGC AAGGGCCCGC GCCGCGCCAT CGCCGGGAAG
AAGAAGGCCG GCAAGAAGTA G
|
|---|
| Protein sequence | MARLSGVDLP REKRVEIALT YIFGIGRSRS RDTLAATGVN PDTRVRDLTD DEVQKLREWI
DANYRVEGDL NREIKQDIRR KMEIGCYQGL RHRRNLPVHG QRTHTNARTR KGPRRAIAGK
KKAGKK
|
|---|
| |