| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6021 |
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| Symbol | rplQ |
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| ID | 5674342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7344112 |
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| End bp | 7344699 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244869 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001510271 |
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| Protein GI | 158317763 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.79372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0972683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACGC CAACCAAGGG CGCCCGGCTC GGCGGCAGCC CCGCACATGA GCGGCTGCTG
CTGGCCAACC TCGCCACCGC GCTGTTCGAG CACGGCGGCA TCACGACCAC CGAGGCCAAG
GCGCGCCGGC TGCGCCCCTA CGCCGAGCGC CTGGTCACCC ACGCGAAGCG AGGTGACCTG
CACGCGCGGC GCCGGGTCAT GCGGGTCGTC CGGAACAACT CGGTCGTCCA CACGCTCTTC
ACCGAGATCG GCCCGCGCTA CGCCGACCGT CCCGGCGGCT ACACGCGGAT CGTGAAGCTC
GGCCCGCGCC GGGGCGACGC GGCGCCGATG GCCCGCATCG AGCTGGTCGA GGCGCTGACC
ATCGCGCAGA CGGCCGTCTC CGAGGCCGAG CGTGCCCGCG GCACCCGGTT CGCGGCCCGC
AAGGCTCCGA CCGGGGCGAC GGCGGAGGCC GCCGACGACC TCAAGAACGA GTCGCCGACC
GCCGCCGCGG TGGCGGCCGA GGCCCAGGCG GAGCAGCCCA CCGCCGAGGC CGTCGCCGCG
GACGACGCGG CGACGACCGA GGCCAAGGAC ACCAAGCCGG AGAGCTGA
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| Protein sequence | MPTPTKGARL GGSPAHERLL LANLATALFE HGGITTTEAK ARRLRPYAER LVTHAKRGDL
HARRRVMRVV RNNSVVHTLF TEIGPRYADR PGGYTRIVKL GPRRGDAAPM ARIELVEALT
IAQTAVSEAE RARGTRFAAR KAPTGATAEA ADDLKNESPT AAAVAAEAQA EQPTAEAVAA
DDAATTEAKD TKPES
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