Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6018 |
Symbol | rplM |
ID | 5674339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7339917 |
End bp | 7340360 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641244866 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_001510268 |
Protein GI | 158317760 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.205125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0856034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCACGT ACCAGCCCAA GCCCGCGGAC GTACAGCGCG CGTGGCACAT CATCGATGCC ACCGACGTCG TGCTCGGTCG GCTGGCCAGC CAGGCGGCCC AGCTCCTGCG CGGCAAGAAC AAGCCGTACT TCGCCCCGCA CATCGACACG GGCGACTTCG TGGTGATCAT CAATGCCGGC AAGGTCGCTA TGACCGGTAA CAAGCGCGAG CAGGCCAAGT ACCACCGGCA CTCGGGCTTC CCGGGCGGTC TGCGCAGCAC GTCCTACGGC GAGCTGCTCG ACACGCGTCC CCACGTGATC GTCGAGCGGG CGATCCGTGG GATGCTGCCT CACAACCGGC TCGGCCGCGC GCAGGGCAGC AAGCTGAAGG TGTACGCGGG CCCGACTCAC CCGCACCAGG CGCAGCAGCC CGTCCCGTAC GAGATCAAGC AGGTCGCGCA GTAG
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Protein sequence | MRTYQPKPAD VQRAWHIIDA TDVVLGRLAS QAAQLLRGKN KPYFAPHIDT GDFVVIINAG KVAMTGNKRE QAKYHRHSGF PGGLRSTSYG ELLDTRPHVI VERAIRGMLP HNRLGRAQGS KLKVYAGPTH PHQAQQPVPY EIKQVAQ
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