Gene Franean1_6013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6013 
Symbol 
ID5674334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7333986 
End bp7334417 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content73% 
IMG OID641244861 
Productzinc finger SWIM domain-containing protein 
Protein accessionYP_001510263 
Protein GI158317755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0209337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.153916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGCG TCAGCCTCGC TTTGCTCGGC CGGGTGGAGC AGCTGCGGAT CCGGCCGACC 
AACGCGTCGG GAACCGTCGA CGACGACGGG CACCAGCAGG TCCGGCTGGA GGCTGGCGAC
GATGGTCCCG GCTCCACGTG CACCTGCTCC GACAGCTCGG GCGGGGTCTT CTGCCGCCAT
GCCGTGGCGG TGGCGCTGGT CGCCACGGGC TCGGCCGGGA TGGCGGAGGA CGACGACGAG
GAGGACGGCC ACGCCGAGGA CCTCTTCGCC GACGATCCCG TGCACGCGGC GATCAGGGTG
TTCCTGAGCC GCGTCCCGCG GGCGGAGCTG GTCGAGACGC TCCTCGACGC CGCCGACGAG
AACGAGGTCG TGGCGGACGT GCTCTGGGAG GCCACGGTGG CCTGGCACGG CCGCCAGCAC
GGAGCCGTCT GA
 
Protein sequence
MEGVSLALLG RVEQLRIRPT NASGTVDDDG HQQVRLEAGD DGPGSTCTCS DSSGGVFCRH 
AVAVALVATG SAGMAEDDDE EDGHAEDLFA DDPVHAAIRV FLSRVPRAEL VETLLDAADE
NEVVADVLWE ATVAWHGRQH GAV