Gene Franean1_6006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6006 
Symbol 
ID5674327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7325021 
End bp7325578 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content74% 
IMG OID641244854 
Productribosomal-protein-alanine acetyltransferase 
Protein accessionYP_001510256 
Protein GI158317748 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0303496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.132582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CTGCCGTGAA CCCGACGCCG AGCGCGGGCG ACGTCGACCT CGTGCCGATG 
CGCTGGTGGC ACCTGGGCGA GATCGCGACC CTGGAGCGGC AGGTCTTCGA CCTGGACCCC
TGGTCGGCCG AGCTCTTCTG GTCGGAGCTC GCGCAGGGCG ACAACCGGCA CTACCTGGTC
GCGGTCGCGG GCGGCTCGAT CGTCGGCTAC GCCGGGCTGG CGCTGCAGGG CGACGAGTCC
TACATCCAGA CGATCGGGGT CGTCCCGGCC ATGCGCGGGC GTCACCTCGG ATCGCGGCTG
ATGATCGCCC AGCTCCGGGA GGCGCGGCGG CGTGGCGCCC GCAGCTGCGG GCTCGAGGTG
CGCACCGACA ACCGGCCTGC GCGGGCCCTC TACACCCGGC TCGGGTTCGT CGATCTCGGC
GTCCGTCGCG GCTACTACCA GCCGTCGGGC GGCGACGCCT ACGTGATGCG CGTGCGGCCG
ATCGACACCG TCGGCTACGG GGCGCTGCTG GACCGGGTCG AGGCGGCCGT CCTGCGGGAC
GCCAGGGCCG CCTCGTGA
 
Protein sequence
MSAAAVNPTP SAGDVDLVPM RWWHLGEIAT LERQVFDLDP WSAELFWSEL AQGDNRHYLV 
AVAGGSIVGY AGLALQGDES YIQTIGVVPA MRGRHLGSRL MIAQLREARR RGARSCGLEV
RTDNRPARAL YTRLGFVDLG VRRGYYQPSG GDAYVMRVRP IDTVGYGALL DRVEAAVLRD
ARAAS