Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6003 |
Symbol | |
ID | 5674324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7322252 |
End bp | 7322986 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244851 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001510253 |
Protein GI | 158317745 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.14161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCGGT CCTCGGGCGC GTCGCCGATG CCGGCCTCCG TCGTGCTCCG GCCCGCCTCC CCGGCGGCGG AGCGACAGGA TGAGCCGTCG GTCGCCGCTG GCCCGTCTGC CGCCGACTGT CCGTCCGTCG CCGCCGACGC GGAGCTCGAG CTGCCCGACG AGGTCCGCGA CGACCTGCGC TGGATCGTCG GCCAGATCCA GCACGGGTAC CTGGCCGCGT CCGCGAGCGC CGTCGGTGGC CTGCCCGGTG GTCTCAAGGG TTTCTACGTG CTGGACGCCG CGGTCGGAGG AACGGCGCAC AACCAGATCG AGGTCGCCCG CCGTTTCTCC ATCGACCGGA CCGTGATGGT CCGGCTGGTC GACGAGATGG AGCGCGCCGG CCTGGTCGAG CGCCGGCCGG ACCCGGCGGA CCGCCGGGCA CGAATGATCA TCGCCACCGA GCGGGGAATC CAGGAGCACG AGCGGGTGCG GCGGCAGCTG CGCGCCGTCG ACGACCACGT CCTGGCGCCG CTGGCGCCCG CGGACCGGGA GGTCTTCACC GGGCTGGCGC GGCTCGTCGC GGCACACCTG GTCGCGATGG ATCCGACCAG GGGTGCCGCC GCGTGCGCCA CGGCCGAGGT CACGCTGCAG AGTGCCACCA CCGGTTGTGG CGGCCCCGGT GCCTGCGCGG GTGTCGCCGG CGCCACCGAC ATCACCGGCG GGCCCGGTGC TGGCCGCGCC GAGCCGAGCT GCTGA
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Protein sequence | MERSSGASPM PASVVLRPAS PAAERQDEPS VAAGPSAADC PSVAADAELE LPDEVRDDLR WIVGQIQHGY LAASASAVGG LPGGLKGFYV LDAAVGGTAH NQIEVARRFS IDRTVMVRLV DEMERAGLVE RRPDPADRRA RMIIATERGI QEHERVRRQL RAVDDHVLAP LAPADREVFT GLARLVAAHL VAMDPTRGAA ACATAEVTLQ SATTGCGGPG ACAGVAGATD ITGGPGAGRA EPSC
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