Gene Franean1_6003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6003 
Symbol 
ID5674324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7322252 
End bp7322986 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content75% 
IMG OID641244851 
ProductMarR family transcriptional regulator 
Protein accessionYP_001510253 
Protein GI158317745 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGGT CCTCGGGCGC GTCGCCGATG CCGGCCTCCG TCGTGCTCCG GCCCGCCTCC 
CCGGCGGCGG AGCGACAGGA TGAGCCGTCG GTCGCCGCTG GCCCGTCTGC CGCCGACTGT
CCGTCCGTCG CCGCCGACGC GGAGCTCGAG CTGCCCGACG AGGTCCGCGA CGACCTGCGC
TGGATCGTCG GCCAGATCCA GCACGGGTAC CTGGCCGCGT CCGCGAGCGC CGTCGGTGGC
CTGCCCGGTG GTCTCAAGGG TTTCTACGTG CTGGACGCCG CGGTCGGAGG AACGGCGCAC
AACCAGATCG AGGTCGCCCG CCGTTTCTCC ATCGACCGGA CCGTGATGGT CCGGCTGGTC
GACGAGATGG AGCGCGCCGG CCTGGTCGAG CGCCGGCCGG ACCCGGCGGA CCGCCGGGCA
CGAATGATCA TCGCCACCGA GCGGGGAATC CAGGAGCACG AGCGGGTGCG GCGGCAGCTG
CGCGCCGTCG ACGACCACGT CCTGGCGCCG CTGGCGCCCG CGGACCGGGA GGTCTTCACC
GGGCTGGCGC GGCTCGTCGC GGCACACCTG GTCGCGATGG ATCCGACCAG GGGTGCCGCC
GCGTGCGCCA CGGCCGAGGT CACGCTGCAG AGTGCCACCA CCGGTTGTGG CGGCCCCGGT
GCCTGCGCGG GTGTCGCCGG CGCCACCGAC ATCACCGGCG GGCCCGGTGC TGGCCGCGCC
GAGCCGAGCT GCTGA
 
Protein sequence
MERSSGASPM PASVVLRPAS PAAERQDEPS VAAGPSAADC PSVAADAELE LPDEVRDDLR 
WIVGQIQHGY LAASASAVGG LPGGLKGFYV LDAAVGGTAH NQIEVARRFS IDRTVMVRLV
DEMERAGLVE RRPDPADRRA RMIIATERGI QEHERVRRQL RAVDDHVLAP LAPADREVFT
GLARLVAAHL VAMDPTRGAA ACATAEVTLQ SATTGCGGPG ACAGVAGATD ITGGPGAGRA
EPSC