Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5993 |
Symbol | |
ID | 5674314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7306917 |
End bp | 7307513 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641244841 |
Product | protein of unknown function ATP binding |
Protein accession | YP_001510243 |
Protein GI | 158317735 |
COG category | [R] General function prediction only |
COG ID | [COG2229] Predicted GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.222654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0335878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTTCG AAAGCTCTGA CCACAGACGG GTCAACTCCG CCGTCGCCAC GACCTCGGTG AAGATCGTGG TGGCGGGCGG ATTCGGCGCC GGCAAGACGA CGTTCGTGGG CTCCGTGTCC GAGATCGTCC CGCTGCGCAC CGAGGCCGTC ATGACCGAGG CCGGCGCGCA CGTCGACGAC CTCACCCACC TCGTGGACAA GACCACCACG ACGGTTGCCA TGGACTTCGG CCGCGTCTCG CTGGACGAGG ACCTGATCCT GTACCTGTTC GGCACGCCCG GGCAGTACCG GTTCTGGTTC ATGTGGGACG ACATCGTGCG CGGTGCCATC GGCGCGATCG TCCTGGCGGA CACCAGACGG CTGGCGGACT GCTTCGCGGC GGTCGACTAC TTCGAGCAGC GTCAGCTGCC GTTCGTCGTC GGCGTGAACT GCTTCGACGG GATCCTGCGC CACTCGATCG AGGATGTCCG CGAGGCCCTG CAGATCAACC AGGCTGTCCC GATCATCACC TGCGACGCCC GTAACCGCGA CTCCACGAAG AGCGCGCTGA TCGCCGTCGT CGAGCACACG ATGTCCCGCG CGGCGGCGCG GACCTGA
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Protein sequence | MAFESSDHRR VNSAVATTSV KIVVAGGFGA GKTTFVGSVS EIVPLRTEAV MTEAGAHVDD LTHLVDKTTT TVAMDFGRVS LDEDLILYLF GTPGQYRFWF MWDDIVRGAI GAIVLADTRR LADCFAAVDY FEQRQLPFVV GVNCFDGILR HSIEDVREAL QINQAVPIIT CDARNRDSTK SALIAVVEHT MSRAAART
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