Gene Franean1_5993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5993 
Symbol 
ID5674314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7306917 
End bp7307513 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID641244841 
Productprotein of unknown function ATP binding 
Protein accessionYP_001510243 
Protein GI158317735 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.222654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0335878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTTCG AAAGCTCTGA CCACAGACGG GTCAACTCCG CCGTCGCCAC GACCTCGGTG 
AAGATCGTGG TGGCGGGCGG ATTCGGCGCC GGCAAGACGA CGTTCGTGGG CTCCGTGTCC
GAGATCGTCC CGCTGCGCAC CGAGGCCGTC ATGACCGAGG CCGGCGCGCA CGTCGACGAC
CTCACCCACC TCGTGGACAA GACCACCACG ACGGTTGCCA TGGACTTCGG CCGCGTCTCG
CTGGACGAGG ACCTGATCCT GTACCTGTTC GGCACGCCCG GGCAGTACCG GTTCTGGTTC
ATGTGGGACG ACATCGTGCG CGGTGCCATC GGCGCGATCG TCCTGGCGGA CACCAGACGG
CTGGCGGACT GCTTCGCGGC GGTCGACTAC TTCGAGCAGC GTCAGCTGCC GTTCGTCGTC
GGCGTGAACT GCTTCGACGG GATCCTGCGC CACTCGATCG AGGATGTCCG CGAGGCCCTG
CAGATCAACC AGGCTGTCCC GATCATCACC TGCGACGCCC GTAACCGCGA CTCCACGAAG
AGCGCGCTGA TCGCCGTCGT CGAGCACACG ATGTCCCGCG CGGCGGCGCG GACCTGA
 
Protein sequence
MAFESSDHRR VNSAVATTSV KIVVAGGFGA GKTTFVGSVS EIVPLRTEAV MTEAGAHVDD 
LTHLVDKTTT TVAMDFGRVS LDEDLILYLF GTPGQYRFWF MWDDIVRGAI GAIVLADTRR
LADCFAAVDY FEQRQLPFVV GVNCFDGILR HSIEDVREAL QINQAVPIIT CDARNRDSTK
SALIAVVEHT MSRAAART