Gene Franean1_5986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5986 
Symbol 
ID5674307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7294433 
End bp7294921 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content72% 
IMG OID641244834 
Productresolvase domain-containing protein 
Protein accessionYP_001510236 
Protein GI158317728 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00224994 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0280728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCTC GCCGCGTCGG GGGGCTGATC CTCGTCGAGG AACCCGCGCG GTCGGCTACC 
GGCATGACGG CGGTGTACGC CAGGGTGTCG TCCGCTGACC AGGAGTCGGA TCTGGACCGG
CAGGTCGCGC GGGTCGTGAC CTGGGCGGCT GGGCGGAACC TGCCTGTCGG GAAGGTAGTG
ACCGAGGTCG GGTCGGCGTT GGGCGGCGAC CGGCGGGAGT TCCTCGCGCT GCTGGGTGAC
CCGCGGGTGT CCACGATCGT CGTCGAGCAC CGCGACCGGT TCGCCCGTTT CGGTGCCGAG
TACGTCGAAG CCGCCCTCGC CGCCTGCGGT CGGCGGCTGC TGGTCGTCGA TCCGGCGGAG
GTCGACGATG ACCTTGTCCG GGATGTCACC GAGATCCTGA CGTCGATGTG TGCCCGGCTG
TACGGGCGCC GCGGCGCTGG GAACAGGGCC CGTCGGGCTG TCGAGGCCGC TACCGGGACC
GTCGAATGA
 
Protein sequence
MPARRVGGLI LVEEPARSAT GMTAVYARVS SADQESDLDR QVARVVTWAA GRNLPVGKVV 
TEVGSALGGD RREFLALLGD PRVSTIVVEH RDRFARFGAE YVEAALAACG RRLLVVDPAE
VDDDLVRDVT EILTSMCARL YGRRGAGNRA RRAVEAATGT VE