| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5956 |
|---|
| Symbol | |
|---|
| ID | 5674277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7260876 |
|---|
| End bp | 7261100 |
|---|
| Gene Length | 225 bp |
|---|
| Protein Length | 74 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641244804 |
|---|
| Product | YcfA family protein |
|---|
| Protein accession | YP_001510206 |
|---|
| Protein GI | 158317698 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1724] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.246481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCC TGCCCCGGGT CTCCGGGGCG AAGGTTGTGA CGGCTCTGGG GCGTGCCGGC
TTCGAGGAGG TCGCCACGCG TGGCTCGCAC TGCAAGCTGC GGCACAAGGA GAACGCCCGG
GTTGTGATCG TCCCGCTTCA TCGGGAGCTG GCGACAGGCA CCCTCGCCTC TGTTCTGCGC
CAGGCGGGCA TCGAGGCGGA GGAGCTTAGG ACGTTGCTCA CCTGA
|
|---|
| Protein sequence | MPALPRVSGA KVVTALGRAG FEEVATRGSH CKLRHKENAR VVIVPLHREL ATGTLASVLR
QAGIEAEELR TLLT
|
|---|
| |