| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5935 |
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| Symbol | |
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| ID | 5674256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7208577 |
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| End bp | 7209176 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244783 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001510185 |
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| Protein GI | 158317677 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0116924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCG GGGCCGGCGC CGACGGGCCG TGCGGGCCGG TCCGCCGGGC CCGGCGTGAC
GCGGTGCATC TGGTCGGCGA CCTGGCGCAT CCGGGCGGAC AGCCTGGAAG GAAGGCGAAC
CGTCGGGGAG GGAACGTGGA CGACAGCGGC TGGGAGCACC TGCGGGGCGA GGCGGTGCGG
GTGGCGCGGC ACGCCTACGC GCCCTACTCG GGCCTGCGGG TCGGCGCTGC GGCGATGGTC
GACGACGGTC GGGTCGTCGT CGGTTGCAAC GTAGAGAACG CCTCCTACGG GCTCACATTG
TGCGCTGAAT GTGGTCTTGT CTCGGCGCTG CGGGCCAGCG GTGGTGGCCG GCTGGTCGCC
TTCGCCTGTG TGGACGGCAC GGGCGCGCCG CTCGCGCCGT GCGGTCGCTG CCGCCAGCTT
CTTCACGAGC ACGGAGGTCC CGAGCTCGAA CTGGCGACCG CGGACGGAAT CCGTACCCTG
GGCGAGCTCC TCCCCGGCGC CTTCGGCCCG GCGGACCTGC CGCCCGCGGC GGAGCAGGCA
CCTGCGGTGG AGCGGGCACC TGCGGCGGAG CGGGCACCTG CGGCGGAGCG CGGAGCATGA
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| Protein sequence | MLVGAGADGP CGPVRRARRD AVHLVGDLAH PGGQPGRKAN RRGGNVDDSG WEHLRGEAVR
VARHAYAPYS GLRVGAAAMV DDGRVVVGCN VENASYGLTL CAECGLVSAL RASGGGRLVA
FACVDGTGAP LAPCGRCRQL LHEHGGPELE LATADGIRTL GELLPGAFGP ADLPPAAEQA
PAVERAPAAE RAPAAERGA
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