Gene Franean1_5925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5925 
Symbol 
ID5674246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7195589 
End bp7196635 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content74% 
IMG OID641244773 
Productpurine nucleotide phosphorylase 
Protein accessionYP_001510175 
Protein GI158317667 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01697] inosine guanosine and xanthosine phosphorylase family
[TIGR01698] purine nucleotide phosphorylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0802572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACG AAGCGCTCGG CCTTCGCGGT GACTCGCCCG CCACCGGCCG GGTCCGTCAT 
CCGACCGCGC AGCACGACCT CGATGAGCTC TCCGTCCTCA AGCGGCACCC GCGGGGGCTT
CCGGACGGAG GGGACGAGGG ACACCTCACC AGTGTGCTCC CGAAACGCCA GGCGGTGCCG
GGCCGGGGCC ACGCGGGAGT GGTATGCCGC GAGTCGTACA GTCGCCTGGT GGCGGACAGC
GACATCATCA GCGCCGCCGC CGACGCCGCG GCGTCGGCGG CCTGCCTGGC CGAGCGCACC
GGGGCCGACC GGCACGACGT CGCGATCGTC CTCGGGTCCG GCTGGCGGCC CGCGGCGGAC
GTCCTGGCTG GTCTCGGCAC CGACGTCGTG GACGTCGACT TCGCCGACCT GGGCGGCTTC
CCCGCCACGG ATGTTCCCGG GCACGCGCCC ACGGCCCGTT CCATCCTGCT CGGCGGGCGG
CGGCTGCTGG TCTTCCTCGG CCGGGTGCAC GCCTACGAGG GCCACGACCT CTCCCGGGTC
GTGCACACCG TCCGCACCGC GCACGCCGCC GGCGCGGGCA CCGTCGTCCT GACGAACGCG
GCCGGTGGGC TGCGTTCCGA CCTGCACGTG GGCCAACCGG TGCTGGTCGC CGACCACCTC
AACCTGACCG GCCGCTCGCC TCTGGTCGGC CCGCTGTTCA CCGACCTCAC CGACGCCTAC
TCGCCCCGGT TGCGCGCTCT CGCCCGCACC GTGGAGCCGA GCCTGGTCGA AGGGATCTAC
GCGGCGCTGC CCGGCCCGCA CTTCGAGACG CCGGCCGAGA TCCGCATGCT GCGCGGGCTC
GGTGCCGACC TCGTCGGCAT GTCGACGGTG CACGAGACGA TCGCCGCCCG GGCGCTCGGC
ATCGACGTGC TCGCGCTCTC GCTGGTCACG AACCTGGCCG CCGGGATGAC CGGCGCGCCA
CTGGACCACA CCGAGGTCCT CGCCGCCGGC GCCGCGGCGG CCGGCCGGAT GGGCTCGATG
CTCGCCGAGG TCATCACCGC GCTTTGA
 
Protein sequence
MPDEALGLRG DSPATGRVRH PTAQHDLDEL SVLKRHPRGL PDGGDEGHLT SVLPKRQAVP 
GRGHAGVVCR ESYSRLVADS DIISAAADAA ASAACLAERT GADRHDVAIV LGSGWRPAAD
VLAGLGTDVV DVDFADLGGF PATDVPGHAP TARSILLGGR RLLVFLGRVH AYEGHDLSRV
VHTVRTAHAA GAGTVVLTNA AGGLRSDLHV GQPVLVADHL NLTGRSPLVG PLFTDLTDAY
SPRLRALART VEPSLVEGIY AALPGPHFET PAEIRMLRGL GADLVGMSTV HETIAARALG
IDVLALSLVT NLAAGMTGAP LDHTEVLAAG AAAAGRMGSM LAEVITAL