Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5923 |
Symbol | |
ID | 5674244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7193241 |
End bp | 7195034 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641244771 |
Product | phosphoglucomutase/phosphomannomutase alpha/beta/subunit |
Protein accession | YP_001510173 |
Protein GI | 158317665 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0961586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGACCG CCCGTGACGA CTCGACACCG AACCAGGCCG GACGGGCCTC GGGCCGGAAG GAACCGGGCC GTCGGGCGGG TGGGGCGTGC CGGCATTCTG GTGGAGCCAT GACCGCCCCC GTCTGCGGGC TGCCCGAGCC GCTGCCGGCA CGGGTCGCGG CCTGGCTTGC TGCGGACCCG GACCCCGGCG ACCGGGCCGA GCTCGCCCGG CTGGTGGCCG CGGGCGACAC CCGCGAGCTC ACCGAGCGTT TCACCGGACC GCTCGCCTTC GGCACCGCGG GGCTGCGCGG GCCGCTGCGG GCCGGGCCGG CCGGGATGAA CACCGCCGTG GTGCGGCGGA CCACCGCCGG CCTCGGCTCC TGGCTACGGC GCCGCGTGAC CGGGCCGCCG GTGGTGGTGA TCGGATACGA CGCCCGCCGG CGCAGCGACC ACTTCGCCCT CGACGCGGCC CGGGTGCTGG CCGGGCAGGG CGTCCGGGCG CTGGTCCTCC CAGAGTCGGG GCCCACCCCG GTGCTGGCGT TCGCCGTCCG CCACCTGGAC GCGGCGGCCG GAATAATGAT CACGGCGAGT CACAATCCGG CGTCCGACAA CGGCTACAAG GTCTATCTCG GCGGTTCCGT GGGTGAGGCG GGGCGGGGCG CCCAGCTCGT CGCCCCGGCT GACACCGAGA TCGAGCACGA GATCGCCGCG GTCGGCCCGG CCGCTGCGAT CCCGCTCGCC GACGGCTGGA CCCGTCTCGA CGCCTCGGTC GTCACCGCAT ACGTCGAGGG CGCGGTGCGC GCGGTCGACA CCGCCGCGCC GGTGGACGGG CCGCCACTGC GGATCGCCTA TACGCCGCTG CACGGCGTCG GCGCCGACGT CCTGGCCGCG GTGTTCGCCC GCGCCGGCCT GCCCGTCCCG GTGCCCGTTG CCGCCCAGCG AGCCCCGGAT CCCGACTTCC CCACGGCGCC GTTCCCGAAC CCGGAGGAGC CCGGGGTGCT CGACGCCGTG CTGGCCCTGG GCGAGCGGGT GGGCGCCGAC CTGGTGCTCG CGAACGACCC GGACGCCGAC CGGTGCGCCG CGGCGGTCGG CGGCCGGGTG CTGACCGGGG ATGAGATCGG GCTGCTGCTG GCCGACCACG TCCTGCGGGC GCGGCCCGGA CCGGTCGCGA CGACCGTGGT CAGCTCCTCG GCCCTGGCGG AGCTCGCCCG CGACCACGGC GTGCCCTGTG CCCAGACCCT GACCGGCTTC AAATGGATCA TGCGTGCCGA TCCCGGCCTC GTGTTCGGCT ACGAGGAGGC CCTCGGCTAC GCCGTGGCCC CCGACCTGGT GCGGGACAAG GACGGCATCA CCGCCGCGCT GGCCCTCGCG CGGGCCGCCC AGCGCGAGAA ACGCGCCGGG CGCACCCTGC TGGACGTCCT CGACGACCTG CACCGCCGCA TCGGCGTGTT CGCCACCGGC CAGGTGTCCG TCCGCCTCGA CGATCTCGCG GCCGTCGCCG CGGCGATGCG CCGGCTGCGG ACGTCCCCGC CCGACCGCGT CGCCGGCCGT CCCGTGACCG CCGTCCGGGA CCTGCTCACC GGCGCGGTGG ACGGTCTCCC GCCCGCGGAC GTCCTGATCT TCGACCTGGA CGGCGGAGCG CGGCTCGTAG CCCGGCCGAG CGGCACCGAA CCGAAGCTCA AGATCTATCT GCAGGCCGTC GCGGACCGTG CGGCCGTGGC GGCGATCGGC CCGGCCGCCG CGCGCCGCCG TGCCCAGACC CAGTTGGACG CGCTGCGCGA CGCCGCCGCC GACCTGCTGG GCCGCGACCA CTAG
|
Protein sequence | MTTARDDSTP NQAGRASGRK EPGRRAGGAC RHSGGAMTAP VCGLPEPLPA RVAAWLAADP DPGDRAELAR LVAAGDTREL TERFTGPLAF GTAGLRGPLR AGPAGMNTAV VRRTTAGLGS WLRRRVTGPP VVVIGYDARR RSDHFALDAA RVLAGQGVRA LVLPESGPTP VLAFAVRHLD AAAGIMITAS HNPASDNGYK VYLGGSVGEA GRGAQLVAPA DTEIEHEIAA VGPAAAIPLA DGWTRLDASV VTAYVEGAVR AVDTAAPVDG PPLRIAYTPL HGVGADVLAA VFARAGLPVP VPVAAQRAPD PDFPTAPFPN PEEPGVLDAV LALGERVGAD LVLANDPDAD RCAAAVGGRV LTGDEIGLLL ADHVLRARPG PVATTVVSSS ALAELARDHG VPCAQTLTGF KWIMRADPGL VFGYEEALGY AVAPDLVRDK DGITAALALA RAAQREKRAG RTLLDVLDDL HRRIGVFATG QVSVRLDDLA AVAAAMRRLR TSPPDRVAGR PVTAVRDLLT GAVDGLPPAD VLIFDLDGGA RLVARPSGTE PKLKIYLQAV ADRAAVAAIG PAAARRRAQT QLDALRDAAA DLLGRDH
|
| |