Gene Franean1_5923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5923 
Symbol 
ID5674244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7193241 
End bp7195034 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content77% 
IMG OID641244771 
Productphosphoglucomutase/phosphomannomutase alpha/beta/subunit 
Protein accessionYP_001510173 
Protein GI158317665 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0961586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCG CCCGTGACGA CTCGACACCG AACCAGGCCG GACGGGCCTC GGGCCGGAAG 
GAACCGGGCC GTCGGGCGGG TGGGGCGTGC CGGCATTCTG GTGGAGCCAT GACCGCCCCC
GTCTGCGGGC TGCCCGAGCC GCTGCCGGCA CGGGTCGCGG CCTGGCTTGC TGCGGACCCG
GACCCCGGCG ACCGGGCCGA GCTCGCCCGG CTGGTGGCCG CGGGCGACAC CCGCGAGCTC
ACCGAGCGTT TCACCGGACC GCTCGCCTTC GGCACCGCGG GGCTGCGCGG GCCGCTGCGG
GCCGGGCCGG CCGGGATGAA CACCGCCGTG GTGCGGCGGA CCACCGCCGG CCTCGGCTCC
TGGCTACGGC GCCGCGTGAC CGGGCCGCCG GTGGTGGTGA TCGGATACGA CGCCCGCCGG
CGCAGCGACC ACTTCGCCCT CGACGCGGCC CGGGTGCTGG CCGGGCAGGG CGTCCGGGCG
CTGGTCCTCC CAGAGTCGGG GCCCACCCCG GTGCTGGCGT TCGCCGTCCG CCACCTGGAC
GCGGCGGCCG GAATAATGAT CACGGCGAGT CACAATCCGG CGTCCGACAA CGGCTACAAG
GTCTATCTCG GCGGTTCCGT GGGTGAGGCG GGGCGGGGCG CCCAGCTCGT CGCCCCGGCT
GACACCGAGA TCGAGCACGA GATCGCCGCG GTCGGCCCGG CCGCTGCGAT CCCGCTCGCC
GACGGCTGGA CCCGTCTCGA CGCCTCGGTC GTCACCGCAT ACGTCGAGGG CGCGGTGCGC
GCGGTCGACA CCGCCGCGCC GGTGGACGGG CCGCCACTGC GGATCGCCTA TACGCCGCTG
CACGGCGTCG GCGCCGACGT CCTGGCCGCG GTGTTCGCCC GCGCCGGCCT GCCCGTCCCG
GTGCCCGTTG CCGCCCAGCG AGCCCCGGAT CCCGACTTCC CCACGGCGCC GTTCCCGAAC
CCGGAGGAGC CCGGGGTGCT CGACGCCGTG CTGGCCCTGG GCGAGCGGGT GGGCGCCGAC
CTGGTGCTCG CGAACGACCC GGACGCCGAC CGGTGCGCCG CGGCGGTCGG CGGCCGGGTG
CTGACCGGGG ATGAGATCGG GCTGCTGCTG GCCGACCACG TCCTGCGGGC GCGGCCCGGA
CCGGTCGCGA CGACCGTGGT CAGCTCCTCG GCCCTGGCGG AGCTCGCCCG CGACCACGGC
GTGCCCTGTG CCCAGACCCT GACCGGCTTC AAATGGATCA TGCGTGCCGA TCCCGGCCTC
GTGTTCGGCT ACGAGGAGGC CCTCGGCTAC GCCGTGGCCC CCGACCTGGT GCGGGACAAG
GACGGCATCA CCGCCGCGCT GGCCCTCGCG CGGGCCGCCC AGCGCGAGAA ACGCGCCGGG
CGCACCCTGC TGGACGTCCT CGACGACCTG CACCGCCGCA TCGGCGTGTT CGCCACCGGC
CAGGTGTCCG TCCGCCTCGA CGATCTCGCG GCCGTCGCCG CGGCGATGCG CCGGCTGCGG
ACGTCCCCGC CCGACCGCGT CGCCGGCCGT CCCGTGACCG CCGTCCGGGA CCTGCTCACC
GGCGCGGTGG ACGGTCTCCC GCCCGCGGAC GTCCTGATCT TCGACCTGGA CGGCGGAGCG
CGGCTCGTAG CCCGGCCGAG CGGCACCGAA CCGAAGCTCA AGATCTATCT GCAGGCCGTC
GCGGACCGTG CGGCCGTGGC GGCGATCGGC CCGGCCGCCG CGCGCCGCCG TGCCCAGACC
CAGTTGGACG CGCTGCGCGA CGCCGCCGCC GACCTGCTGG GCCGCGACCA CTAG
 
Protein sequence
MTTARDDSTP NQAGRASGRK EPGRRAGGAC RHSGGAMTAP VCGLPEPLPA RVAAWLAADP 
DPGDRAELAR LVAAGDTREL TERFTGPLAF GTAGLRGPLR AGPAGMNTAV VRRTTAGLGS
WLRRRVTGPP VVVIGYDARR RSDHFALDAA RVLAGQGVRA LVLPESGPTP VLAFAVRHLD
AAAGIMITAS HNPASDNGYK VYLGGSVGEA GRGAQLVAPA DTEIEHEIAA VGPAAAIPLA
DGWTRLDASV VTAYVEGAVR AVDTAAPVDG PPLRIAYTPL HGVGADVLAA VFARAGLPVP
VPVAAQRAPD PDFPTAPFPN PEEPGVLDAV LALGERVGAD LVLANDPDAD RCAAAVGGRV
LTGDEIGLLL ADHVLRARPG PVATTVVSSS ALAELARDHG VPCAQTLTGF KWIMRADPGL
VFGYEEALGY AVAPDLVRDK DGITAALALA RAAQREKRAG RTLLDVLDDL HRRIGVFATG
QVSVRLDDLA AVAAAMRRLR TSPPDRVAGR PVTAVRDLLT GAVDGLPPAD VLIFDLDGGA
RLVARPSGTE PKLKIYLQAV ADRAAVAAIG PAAARRRAQT QLDALRDAAA DLLGRDH