Gene Franean1_5922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5922 
Symbolupp 
ID5674243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7192326 
End bp7192949 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content74% 
IMG OID641244770 
Producturacil phosphoribosyltransferase 
Protein accessionYP_001510172 
Protein GI158317664 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.152418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGTTC AGGTCGTCGA TCATCCGCTG GCAGCGACCG CGCTCACCGT CCTGCGGGAC 
GAGCGCACGG CACGCGCCGC CTTCCGCGCC GCCCTGCACG ACCTGTCGAC GATGCTCGTC
TACGAGGCGA CCCGCGAGCT GCCGACGATG CCCGTCTCGG TGACGACGCC GCTGGCGACC
ACCGCCGGGG TGGTGCTCGC GGCCGAGCCG GTGGTCGTGC CCGTGCTGCG GGCCGGTCTC
GGCATGCTGC CGGCCGCGCT CACCCTGATG CCGGACGCGC GGTCGGCGTT CATCGGCCTC
TCCCGCGACG AGACGACCTT CGAGCCCCGG GTCTACCTCG AGTCGGTGCC GGCGGACCTG
GCGGGGCGGC CGGTGTTCCT GCTCGACCCG ATGCTGGCGA CCGGCGGCTC CGCGCTGCAC
GCACTGCGGC TGCTCACCGC CCGGGGCGCG ACCGGCATCG TCGTGGTCTC CGTCGTCGCC
GCGCCAGAGG GGGTCGCCGC GCTGGAGGGC AGCGGCCTGG ACATCAGCGT GGTCACCGCC
GTGGTGGACG AGAAGCTGAA CGACACCGCC TACATCGTTC CGGGGCTCGG CGACGCCGGC
GACCGGATCT ACGGCGCCGT CTAG
 
Protein sequence
MQVQVVDHPL AATALTVLRD ERTARAAFRA ALHDLSTMLV YEATRELPTM PVSVTTPLAT 
TAGVVLAAEP VVVPVLRAGL GMLPAALTLM PDARSAFIGL SRDETTFEPR VYLESVPADL
AGRPVFLLDP MLATGGSALH ALRLLTARGA TGIVVVSVVA APEGVAALEG SGLDISVVTA
VVDEKLNDTA YIVPGLGDAG DRIYGAV