Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5922 |
Symbol | upp |
ID | 5674243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7192326 |
End bp | 7192949 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641244770 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_001510172 |
Protein GI | 158317664 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.152418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGTTC AGGTCGTCGA TCATCCGCTG GCAGCGACCG CGCTCACCGT CCTGCGGGAC GAGCGCACGG CACGCGCCGC CTTCCGCGCC GCCCTGCACG ACCTGTCGAC GATGCTCGTC TACGAGGCGA CCCGCGAGCT GCCGACGATG CCCGTCTCGG TGACGACGCC GCTGGCGACC ACCGCCGGGG TGGTGCTCGC GGCCGAGCCG GTGGTCGTGC CCGTGCTGCG GGCCGGTCTC GGCATGCTGC CGGCCGCGCT CACCCTGATG CCGGACGCGC GGTCGGCGTT CATCGGCCTC TCCCGCGACG AGACGACCTT CGAGCCCCGG GTCTACCTCG AGTCGGTGCC GGCGGACCTG GCGGGGCGGC CGGTGTTCCT GCTCGACCCG ATGCTGGCGA CCGGCGGCTC CGCGCTGCAC GCACTGCGGC TGCTCACCGC CCGGGGCGCG ACCGGCATCG TCGTGGTCTC CGTCGTCGCC GCGCCAGAGG GGGTCGCCGC GCTGGAGGGC AGCGGCCTGG ACATCAGCGT GGTCACCGCC GTGGTGGACG AGAAGCTGAA CGACACCGCC TACATCGTTC CGGGGCTCGG CGACGCCGGC GACCGGATCT ACGGCGCCGT CTAG
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Protein sequence | MQVQVVDHPL AATALTVLRD ERTARAAFRA ALHDLSTMLV YEATRELPTM PVSVTTPLAT TAGVVLAAEP VVVPVLRAGL GMLPAALTLM PDARSAFIGL SRDETTFEPR VYLESVPADL AGRPVFLLDP MLATGGSALH ALRLLTARGA TGIVVVSVVA APEGVAALEG SGLDISVVTA VVDEKLNDTA YIVPGLGDAG DRIYGAV
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