Gene Franean1_5917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5917 
Symbol 
ID5674238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7188583 
End bp7189299 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content74% 
IMG OID641244765 
Productphosphoglycerate mutase 
Protein accessionYP_001510167 
Protein GI158317659 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.492439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACA CCGATCTGCT GCTGGTCCGG CACGGCGAAG CACACTGCGA CACCGCGGGC 
ATCGCCGGCG GCGATCTCGG CTGCACCGGC CTGACCAGGC GAGGACGTTC CCAGGCAGAA
CGAGCCGCCC GCCGGCTGAC AGTCATGCAC ACCATGGAAC GCCGGGTGGA CGCGGTGTAC
GCCGACCCAC GCCGCCGGGT CCGGGAGACC GCGGAGATCA TCGCGGGCCG GCTGCGGATG
CCGGTGATCC TCGAACCCCG GCTGGCCGAG GCCGGCCACG GCAGCGCCGA CGGCCAGTCC
TGGACCGACA TCCGGACCAC GTTCGGCGGC ACGCCCGCGG ACCGGCCCGA CGACCCGGTC
GCCCCCGGCG CGGAAAGCTG GAACCACTTC GTCGACCGGG CGGCCGCTGG GCTGCGGCAC
ATGGTGGAGC GCCACCGCGG CCAACGAGCC CTGGTCGTCA CGCACGCGGC GACCGTCGAG
GTGGCGCACG CGACGATGCT CGGGCTGCCG CACGACCCCG ACCCGCGGGC CGCGTTCGTG
CTGGCGCACG CGTCCATCAC CTGGTGGTCG CACCGCACCT CGGAGACCGG CCCGCCCCGG
TGGCATCTGG TGTGGCACAA CTCCACCGCG CATCTGGCCC ACAGCCTGTT CGACCGGGAC
GTCGAGCCCG CCGTCCGGAC GCGCCGTGAC GTACGGCGGC CGCCGGGCCG TCCGTAG
 
Protein sequence
MPDTDLLLVR HGEAHCDTAG IAGGDLGCTG LTRRGRSQAE RAARRLTVMH TMERRVDAVY 
ADPRRRVRET AEIIAGRLRM PVILEPRLAE AGHGSADGQS WTDIRTTFGG TPADRPDDPV
APGAESWNHF VDRAAAGLRH MVERHRGQRA LVVTHAATVE VAHATMLGLP HDPDPRAAFV
LAHASITWWS HRTSETGPPR WHLVWHNSTA HLAHSLFDRD VEPAVRTRRD VRRPPGRP