Gene Franean1_5912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5912 
Symbol 
ID5674233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7182745 
End bp7183290 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID641244760 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001510162 
Protein GI158317654 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.824829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCCGCG GTCGTCCGGG ATGCGACGAT CAGGCGGTGG CGTTCCCCGA CGACGTTCTG 
ACCGACGACG AAGATGTGGT CCTCCACCTG CACCCGCACT GGGGCAGCCT GGTGGTGCCG
GCATTCTCCG TCGTCGCCGC GCTCGCCCTC ACGACCTTCG GCGTGTTCTT CGTTCCGGAC
GGCTTCCTGC GTGAGGCGGT CCAGTACCTC ATCCTCGCCC TGGGGCTGGC CGCCATCGGG
TACTTCGGAG CGGCCCCCTG GCTGCGCTGG ATCACCACCC ACTATGTGAT CACGACCGAG
CGGCTGATGA TCCGTGAGGG GATCGTGACC CGATCCGGGC GCGACATCCC GCTCGTCTGG
CTCAACGACG TCTCCTATGA GCAGAGCCTG CTCGACCGGA TGCTCAGCGC GGGGACGCTC
TCCATCGAGA GCGCTGGCGA GCGTGGGCGG ATGGTCCTCT CACACGTCCC GCGGGTCGAG
GATGTGCACG CCACGCTGTA CGAGCTGGCC GAGGCGGCGG ACGGCCGCCG CCGCTCCGGC
GGCTGA
 
Protein sequence
MCRGRPGCDD QAVAFPDDVL TDDEDVVLHL HPHWGSLVVP AFSVVAALAL TTFGVFFVPD 
GFLREAVQYL ILALGLAAIG YFGAAPWLRW ITTHYVITTE RLMIREGIVT RSGRDIPLVW
LNDVSYEQSL LDRMLSAGTL SIESAGERGR MVLSHVPRVE DVHATLYELA EAADGRRRSG
G