Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5912 |
Symbol | |
ID | 5674233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7182745 |
End bp | 7183290 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641244760 |
Product | membrane-flanked domain-containing protein |
Protein accession | YP_001510162 |
Protein GI | 158317654 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.824829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCCGCG GTCGTCCGGG ATGCGACGAT CAGGCGGTGG CGTTCCCCGA CGACGTTCTG ACCGACGACG AAGATGTGGT CCTCCACCTG CACCCGCACT GGGGCAGCCT GGTGGTGCCG GCATTCTCCG TCGTCGCCGC GCTCGCCCTC ACGACCTTCG GCGTGTTCTT CGTTCCGGAC GGCTTCCTGC GTGAGGCGGT CCAGTACCTC ATCCTCGCCC TGGGGCTGGC CGCCATCGGG TACTTCGGAG CGGCCCCCTG GCTGCGCTGG ATCACCACCC ACTATGTGAT CACGACCGAG CGGCTGATGA TCCGTGAGGG GATCGTGACC CGATCCGGGC GCGACATCCC GCTCGTCTGG CTCAACGACG TCTCCTATGA GCAGAGCCTG CTCGACCGGA TGCTCAGCGC GGGGACGCTC TCCATCGAGA GCGCTGGCGA GCGTGGGCGG ATGGTCCTCT CACACGTCCC GCGGGTCGAG GATGTGCACG CCACGCTGTA CGAGCTGGCC GAGGCGGCGG ACGGCCGCCG CCGCTCCGGC GGCTGA
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Protein sequence | MCRGRPGCDD QAVAFPDDVL TDDEDVVLHL HPHWGSLVVP AFSVVAALAL TTFGVFFVPD GFLREAVQYL ILALGLAAIG YFGAAPWLRW ITTHYVITTE RLMIREGIVT RSGRDIPLVW LNDVSYEQSL LDRMLSAGTL SIESAGERGR MVLSHVPRVE DVHATLYELA EAADGRRRSG G
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