| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5904 |
|---|
| Symbol | |
|---|
| ID | 5674225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7173151 |
|---|
| End bp | 7174116 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641244752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510154 |
|---|
| Protein GI | 158317646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03089] conserved hypothetical protein TIGR03089 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.638533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGTCC GGTTCGTCCC AGCACCGTCG ATCCTTCCCG GCGGCTCCGT GCCGCCCGAC
GCGCCGCCCG CGCGGTTCCC CGGGGTGGCC GCCGCGCTCG CCGCGCGGCT CGCGCGCGAC
CCGGCGCGTC CGATGATCAC TTTTTACGAC GACGCCACCG GCGAGCGGGT GGAGTTCTCC
ACCACGACGC TGGACAACTG GGTGGCGAAG ACGGCGAACC TGCTCGGTGA CACGGTCGGC
CTCACGCCCG GGGACGCGGT GGGCGTCGAC CTGCCGGCGC ACTGGACGAC CTGCGTCATC
CTGCTGGCGG CCTGGTCGGC GGGGCTCGAC GTGCATGTCG CCGTCGGCCC GGAGACGCCG
GACGGCGGCC CCGGCGGCAA GGGAGCCGAG GGAGCGGAGG GTGCCGGGCC GCCGGTCACC
GGCGCCGGCG GCTACACCGG CGCCGGCACC GCTCCGGAGG AGCTCGGTGT CGTCTTCGTC
AGCGAGGACC GGCTCGAGAT CGCCACCGGA CTGGGCGTCG ACGAGATCGT CGCGCTGTCG
CTGCGTCCGC TCGGTGGCCG GCTGCGGCGT CCGGTGCCGG GCGTGCTCGA CTACGCGGTC
GAGGTGCCGC CGCACGGCGA CCGCTACGCG GCGCCGCCGC CGCCCGCGGG CCAGGCGGAG
CTGATCCGCA TCGCCGAGAG CGCCGCCCGC CGCGCCGGGC TGGGCCCGGA CGACCGGATC
CTCACCGCGG CCGGGCCCGC CACCGCCGCC GGCCTGCTCA CCGGGATCCT CATCCCGCTG
GTCAGCGGCG CGTCGGTCGT GCTGTGCCGC AACCTGGACA GCATCGAGCC GGCGGCGCTG
GCCCGCCGGG CCGACAGCGA ACGGATCACC GCGGTGGACT GGTCCGTGCC GGGGCCACTC
ACCGAAGCCC TGCCGGCCGG GGTTCGTCCC ATCGACCCCG TCGACGCGCA TGCCCGGCGG
CGGTAG
|
|---|
| Protein sequence | MDVRFVPAPS ILPGGSVPPD APPARFPGVA AALAARLARD PARPMITFYD DATGERVEFS
TTTLDNWVAK TANLLGDTVG LTPGDAVGVD LPAHWTTCVI LLAAWSAGLD VHVAVGPETP
DGGPGGKGAE GAEGAGPPVT GAGGYTGAGT APEELGVVFV SEDRLEIATG LGVDEIVALS
LRPLGGRLRR PVPGVLDYAV EVPPHGDRYA APPPPAGQAE LIRIAESAAR RAGLGPDDRI
LTAAGPATAA GLLTGILIPL VSGASVVLCR NLDSIEPAAL ARRADSERIT AVDWSVPGPL
TEALPAGVRP IDPVDAHARR R
|
|---|
| |