| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5898 |
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| Symbol | |
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| ID | 5674219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7163126 |
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| End bp | 7164823 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244746 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001510148 |
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| Protein GI | 158317640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.41818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGA GCACTCAGAC TCCCGACACG GCGGCGCGGC ACGGCAGCCG TCCCGTCCTT
GTCGCCGTCG CGTGGCCGTA TGCCAACGGG GCACCGCATC TCGGGCACAT CGCCGGCGCC
TACCTGCCCG CGGACATCTT CGCCCGCTAC CAGCGCATGG CGGGCAACCG GGTGCTGATG
GTCTCGGGGT CCGACGCGCA CGGCACCCCG ATCACGGTCC GGGCGGACGA GGAGGGCGTC
TCCCCGCAGG AGATCGTCGA CCGGTACCAC CCGGAGTTCC TGCGCATCTG GTCCGAGCTC
GGGATCAGCT TCGACCTTTT CACGAGCACC CGGACGGACA ACCACAGCGC GGTCGCCCAG
GACGTGTTCA CCCGCCTGCG CGAGGCCGGT TACATCTACG CCAAGGAGAC CTCGCAGTTC
TACGACCCGG ACGCGGGGCG CTTCCTGCCC GACCGGTACG TCGTCGGCAC CTGCCCGCAC
TGCTCGTATC AGCAGGCGCG CGGCGACCAG TGCGAGAACT GCGGGCGCAC CCTCGACCCG
GAGCTGCTGA TCGACCCGCG CAGCAAGGTG ACCGGGGCCG TCCCGGAGAT GCGCCAGACG
ACGCACTTCT TCCTGCGGCT GTCGAGCCTG GCCGACCAGC TCCTCGACTG GTTGCAGACC
CGCCAGGGCT GGCGCCGGCA CGTCCTGAAC TGGTCGGTGC AGTTCGTCAA GGACGGCCTG
CACGACCGCG CGATCACCCG GGACCTGGAC TGGGGCGTCC CGCTGCCGAC CGACGAGCTC
GGTCCGGGCA AGCGGCTCTA CGTCTGGTTC GAGGCCGTGA TCGGCTACCT GTCGGCGAGC
AAGGAGTGGG CGGCCGCCTC GGGTGATCCG GAGGCATGGC GGGCCTGGTG GGAGGACCCC
GAGGCGGCGG CGTACTACTT CGTCGGCAAG GACAACATCC CCTTCCACAC CGTCATCTGG
CCGGCGATGC TGATCGGCTA CGGCGGCCTG AACCTGCCGA CGGACGTCCC GGCGAACCAG
TACGTCACCT TCGGCGGGGC GAAGGCGTCG AAGTCGGCGG GCATCGGGCG CGGGGTGCGC
GAGTACCTCG ACCTGCTCCA GCCGGACGCG CTGCGCTTCG CCCTGGCCTC GGTGCTGCCC
GAGCAGAACG ACACCGAGAT CTCGGACGCG GACATCATCC GCCGGGTGAA CGACGAGCTG
ATCGCCAACT GGGGCAACCT CGTCAACCGG GTCCTCGCCC AGATCAACAA GTTCTTCGAC
GGCGAGCTGC CGGAGACCGG CGAGCTCGAC GGCGTGCACG CGGCGCTGCT CGACTCGGTG
GACGCCGGCC TCGTCCGGGT CGGCGAGCTG CTGGGCAAGG TCGAGCAGCG GGCGGCGCTG
CGGGCGGCGA TGGAGATCTC CGCCGAGGTG AACGCCTACC TCTACCGCGA GGAGCCGTGG
AAGACCGTCA AGGTCGACCG GGCGGCCGCG GCGCGCAGCC TTGCGGTCTC CATCCAGGCG
ATCTCCGGCA TCACCACCGC GCTGGCCCCG TTCCTGCCGT TCAGCTCGGA CCGGGTGGCC
GAGGTGCTGG GCATCGACCT CGACGGCTGG GAGCGCCGAC CCGTCCCGGC CGGTCGTCGC
CTCGCGTGGT CCGGCGGCCT GTTCACCAAG CTGGACGTCG GCGCGCTGGA CAAGGCCTCG
CTGGACGCCG ACGCCTGA
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| Protein sequence | MAVSTQTPDT AARHGSRPVL VAVAWPYANG APHLGHIAGA YLPADIFARY QRMAGNRVLM
VSGSDAHGTP ITVRADEEGV SPQEIVDRYH PEFLRIWSEL GISFDLFTST RTDNHSAVAQ
DVFTRLREAG YIYAKETSQF YDPDAGRFLP DRYVVGTCPH CSYQQARGDQ CENCGRTLDP
ELLIDPRSKV TGAVPEMRQT THFFLRLSSL ADQLLDWLQT RQGWRRHVLN WSVQFVKDGL
HDRAITRDLD WGVPLPTDEL GPGKRLYVWF EAVIGYLSAS KEWAAASGDP EAWRAWWEDP
EAAAYYFVGK DNIPFHTVIW PAMLIGYGGL NLPTDVPANQ YVTFGGAKAS KSAGIGRGVR
EYLDLLQPDA LRFALASVLP EQNDTEISDA DIIRRVNDEL IANWGNLVNR VLAQINKFFD
GELPETGELD GVHAALLDSV DAGLVRVGEL LGKVEQRAAL RAAMEISAEV NAYLYREEPW
KTVKVDRAAA ARSLAVSIQA ISGITTALAP FLPFSSDRVA EVLGIDLDGW ERRPVPAGRR
LAWSGGLFTK LDVGALDKAS LDADA
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