| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5890 |
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| Symbol | |
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| ID | 5674212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7152520 |
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| End bp | 7153452 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641244739 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001510141 |
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| Protein GI | 158317633 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.706739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.557903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGGG TGGCTGATCT GTCCACGCTC CCGAAACCGG AGCCGACGCG CGGCGCTCCG
GCGAACCGTC CGCGCGGGTC CGGTGCGCGT CACGTCGACC ATCGCAGCCG TGCGCAGACC
CGGGTCCGCT GGGAGCTGCT GCGAAACCTG ATCCGCAAGG ACCTGAAGGT CAAGTACAAG
GGATCGTCGC TCGGTTTCGC CTGGTCACTG GCGAATCCGC TGCTCCTCCT GGCCGTCTAC
ACCTTCGTCT TCCAGGTCGT TCTGAAAAGT GGGATCGACA ACTTCGGCTT CTATCTGATG
TCGGGACTGC TGGTCTGGAA CGCGTTCTCA GGCAGTGTCT CGGCCGCCTG CGGCGCCGTG
GTGGGCAATG CCAACCTGGT GAAAAAGGTG CGCTTCCCGC TGCTGGTGCT GCCGCTGTCG
GCGGTCGGCT TCTCCGCGGT GCACTTCGCG CTCCAGCTCG CGGTGCTCTT CGCCGTCATG
CTGGGGTTCG GCTACAGCCT GCTCGGGCCG GAGCTACTGC TGCTGATCCC GGCCGGCGCG
GTGGCTCTGC TGTTCACCGT GGCGCTGTCG GTGCTGGTGT CCGCGCTCAA CGTCCGTTAC
CGCGACACCC AGCACCTGCT GGACGTCGCC CTGCTCGCCT GGTTCTGGAT CAACCCGATG
GTCTACGCGT TCGGCCTGAT CGAGAACAGG CTGAACGAGT GGACGTGGGT GTACATGCTC
AATCCGATGG CGGTCGTCGT GACCACCTTC CAGCGGGCGA TCTACGATCC GCCCGAGGGG
AACTCGACCG GCTCGGCGCC GATCCTTGCC GATCTGGGGT ACCGCTTCTA CCTCGAACAC
CTGGCGATCG CCGGGCTCAT CTCGCTGGCC GTGCTGTGGC TGGGGCTGCG AGTGTTCCGG
CGGCTGCAGG CCGACTTCGC CGAGGACCTC TAG
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| Protein sequence | MSRVADLSTL PKPEPTRGAP ANRPRGSGAR HVDHRSRAQT RVRWELLRNL IRKDLKVKYK
GSSLGFAWSL ANPLLLLAVY TFVFQVVLKS GIDNFGFYLM SGLLVWNAFS GSVSAACGAV
VGNANLVKKV RFPLLVLPLS AVGFSAVHFA LQLAVLFAVM LGFGYSLLGP ELLLLIPAGA
VALLFTVALS VLVSALNVRY RDTQHLLDVA LLAWFWINPM VYAFGLIENR LNEWTWVYML
NPMAVVVTTF QRAIYDPPEG NSTGSAPILA DLGYRFYLEH LAIAGLISLA VLWLGLRVFR
RLQADFAEDL
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