| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5889 |
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| Symbol | |
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| ID | 5674211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7149587 |
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| End bp | 7152178 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244738 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001510140 |
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| Protein GI | 158317632 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5610] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0387615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.138972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCACCG ACGTCCGACT TCGCGAGGTC TGGTCGCATC TGGAGTCGGG CGGTGCGCAG
GCCCTGACTC TGGACGTATT CGACACTCTG CTCTGGCGCA TGGTGCCCGA GCCGGTTCAC
GCGTTCATCA CCCTGGGGCA CCGGCTGGCC GACCTCGGCC AGCTGCCGTC CGGTGTCACG
CCGGGCGAGT TCGCCCGGCT GCGGGTCTTC GCCGAGCACA AGGCCAGGCT GCACTCGCAC
GAGGTGCGCG GCACCCACGA GGTGCGCCTG GACGAGATCT GGCAGGTTCT CGTCCCCGCG
CTGCCCGGCG CGGGCAGCAT CGGCGACCTG ATGGACGTCG AGCTCGCCGT CGAGCGGGAC
CTGTGCCGCG CCGACCTGGC CGTGGTGGAG CTCGCCGAGC TCGCCATGAC CAAGCTCGGC
CTGCCGGTCT ACCTGCTCTC CGACACATAC TTCTCGGCCG CCCAGCTCGA GCGGCTGCTC
AGCCGCCCGG AGCTCGCCGG GGTGCCGTTC ACCCAGATCT TCACCTCCTC CGACTCGGGG
ATCAGCAAGA GCGACGGGCT GTTCCGGCAC ATGCTGGCGG CCTCGAACCT GCAGCCCTCG
CGGGTCGTCC ACCTCGGCGA CCACCCGGTC GCGGACGTGG AGAGCGCCCG CGAGCACGGG
CTGGTCGCCA TCCACTACCC GAAGTACTCG GGTTCGCTGA AGGCGACGAT CGAGCTGGAG
GGCCTGCTCA CCGGCCCCGG GGACGACACC CCCCTCGACG CCGCCAACGG CGACTACGGC
ATGACCGCGC TGCGGGCCCG CTCGCTGCAC CGGGCGGACG CCGCCGCCGT CCCGCCGGGG
CTGCGGCGCT ACTGGGAGTC CGGGGCGACG GTGTTCGGCC CGGTCTTCAC CGGGTTCGCC
GACTGGGCGG TGGAACGCAC CGGGGACCAC GGCGCCGACC ACATCTACTG CCTGATGCGG
GAGGGTGACT TCCTCTCCCG GCTGATCGCC GACCCGGGTG CCGACGCCGG GGTGACCACC
TCGACGCTGT GGGCGTCCCG GCAGGTCTGC GCGCTGGCCA ACGTGTTCGA GGGCAGCCCC
GAGGAGCTGC GCGGGTTCCT CGTCCGCCGG CACGCGCCCA GCGTCGGCCA GCTGCTGCGC
CAGCTCGGGG TGGCCATCGA CAACGTCGCC GGCATCTCCT CGCTCACCGA CCGCCGGCTC
GACGTCCCCG GCCTGCTCGA CGACACTCTC GAGGCGCTGT GCTCCGACGA GCGCATCCGC
AGCGAGATCG TGCTGACCGC CGGCCGGCTG CGTGACCGCT ACGTCCAGTA CCTCGACACC
CAGCTGCCCG ACTCGGGCCG CATCGTGCTG GTCGACCTGG GCTGGGGCGG CACCATCCAG
GCGCTGCTCG CCCGGCTGCT CGCCTCCACC GGGCGCGAGT TCGACGTCGT CGGCCTGTAC
ATGGCGACGA ACGCCGCCGC CGGCACGCAC CGCCTCGCCG GCCTGCAGAT CGAGGGTTAC
GCGGCCTCCG GCGGGCAGCC CGAGCTGATG GCCAACCAGC TCATGCGCAG CCCCGAGGTG
CTCGAACAGC TCTGTATGCC CGACATCGGC TCGCTGGTCT CCTTCGACGA CGACGGCCGG
CCCGTCCTGA GCATCGACCG GACGTCGCGG ACCCAGGTCG CCCAGCGGAC CGCCGTCCAG
GACGGCATCC TCGCCTTCCA GCGGGAATGG CTGCGCTACC GGCGCTCGGA GACGGCGATG
CCGTCGCTGT CCGAGCCCGG GGCCCGGCAC GCGTCGCTGC GGACGCTGAC CCGGTTCGTC
TCCCGTCCCA CCGCGGCCGA GGCGTCGGCG TTCGGGGCCT GGGCGCACGA CGACAACTTC
GGCTCCGACT CCACCGAGGG CCTGCTCCCG CCCGAGCTGG TCCGCCGGAT GCCCTACCTG
ACCCCCGCGG ACGTCGAGAA GATCACGATG CGGGAGCTGT ACTGGCCCGC GGGCGTGGCC
GGAGTCGCGA ACCGGTCGCT CGCGGTGATC AGCGGCCTGG CGGCCGCGGC CGGGGTGCCC
GCCGAGGAGG TCTCCCCGGA GGCCGCGGCC GGCCCCGTCG AGGTGTACGT CGACACCGGC
ACCGACTTCG TCCACGGGCA GAAGGAGACC GCGGTCACCC GTTCCGGCCG GGACGGGATG
TCGATCGTGC GCCTGCGCAT CGACGGGGTC GGCGTCCGGC GGGTGCGCAT CGACCCGGCC
GGCCGGCGCG GCCTGCTCCG TCTCGACTGG CTGACGATCT CGTTCCACCT GCACAACGCC
GTCGAGCCGT ACAAGGTGAC CGTCACGTCG CTGGACGACC TCGCCGGCCA GCAGATCGCG
CTGGTCGGGG TCCGCCTGCT GCAGGCCAAC CTGCTGGAGA TCGTCGGCGA CGATCCCCAG
ATCATCTACA CGATTGACTT CACCTCCCAG CCCACGCTGG GCGGAACGTA CGCGATCGAG
GTCGAGATGG CTTTCGGCTG GTTGGGGATC CGGGCCGACA CGCTTCAGGT GCGCACGGCC
GGTGTCGCCC GCACCGGCCT GCCCGTCCGC GCCGCCCGCA AGATCCGTCG CGAGCTGGGC
GGCCTGCGAT GA
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| Protein sequence | MFTDVRLREV WSHLESGGAQ ALTLDVFDTL LWRMVPEPVH AFITLGHRLA DLGQLPSGVT
PGEFARLRVF AEHKARLHSH EVRGTHEVRL DEIWQVLVPA LPGAGSIGDL MDVELAVERD
LCRADLAVVE LAELAMTKLG LPVYLLSDTY FSAAQLERLL SRPELAGVPF TQIFTSSDSG
ISKSDGLFRH MLAASNLQPS RVVHLGDHPV ADVESAREHG LVAIHYPKYS GSLKATIELE
GLLTGPGDDT PLDAANGDYG MTALRARSLH RADAAAVPPG LRRYWESGAT VFGPVFTGFA
DWAVERTGDH GADHIYCLMR EGDFLSRLIA DPGADAGVTT STLWASRQVC ALANVFEGSP
EELRGFLVRR HAPSVGQLLR QLGVAIDNVA GISSLTDRRL DVPGLLDDTL EALCSDERIR
SEIVLTAGRL RDRYVQYLDT QLPDSGRIVL VDLGWGGTIQ ALLARLLAST GREFDVVGLY
MATNAAAGTH RLAGLQIEGY AASGGQPELM ANQLMRSPEV LEQLCMPDIG SLVSFDDDGR
PVLSIDRTSR TQVAQRTAVQ DGILAFQREW LRYRRSETAM PSLSEPGARH ASLRTLTRFV
SRPTAAEASA FGAWAHDDNF GSDSTEGLLP PELVRRMPYL TPADVEKITM RELYWPAGVA
GVANRSLAVI SGLAAAAGVP AEEVSPEAAA GPVEVYVDTG TDFVHGQKET AVTRSGRDGM
SIVRLRIDGV GVRRVRIDPA GRRGLLRLDW LTISFHLHNA VEPYKVTVTS LDDLAGQQIA
LVGVRLLQAN LLEIVGDDPQ IIYTIDFTSQ PTLGGTYAIE VEMAFGWLGI RADTLQVRTA
GVARTGLPVR AARKIRRELG GLR
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