Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5884 |
Symbol | |
ID | 5674207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7141282 |
End bp | 7141956 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641244734 |
Product | putative acetyltransferase |
Protein accession | YP_001510136 |
Protein GI | 158317628 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.286625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGACGT TCAGAGGTGA TCTACGGGAG TATGTGCGCC ATGTGCGGAC TCTGCGGGCG GCGCGGGAGA CCTCGGCCCG TTCGTTCGTG GCCGGTCTTC GGTATCCACT CGCGCACAAG CAGCCGATCT GGATCGGTTC ACCGACAGTG ATCGAGGGTC ACGAGCGGAT CGAGTTCGCC GACGGCGCCG CGCTGCGGAT CGGGCTCGCT CCGTTCGGGC TCACCACCAA GCACGACGTG TCGATCCTGC GCGTGCACCC GGAGGGCCGG GTGCGCTGCG AGGGCGTCGT CTCGCTGCAG CGCGGGATCC GCGTCGTGGT CGACTCGGGG GTGCTCGAGC TCGGCCCGTT CGCCAACATC AACGGCTTCG CGAAGATCCT CGTCCGGGAA CGGGTGAGGA TCGGCGCGTA CTGCAACGTG TCGTGGGACA CCCAGCTGCT CGACAACGAC TTCCACCCGA TGGTCGTGGA CGGCGTGGAA AAGCCCATGA GCGGGCCGAT CGTGCTGGAG GACCGGGCCT GGATCGGTGC CAGGGCGATC GTCCTGAAGG GTGTGACCGT CGGGGAGAGC GCCGTCGTCG CCACCGGTGC CGTGGTGACG AAGGACGTCC CGCCCAAGGC GGTAGTGGCC GGCTCACCGG CGAAGATCGT CGGGCACATC GACTACTGGC GCTGA
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Protein sequence | MGTFRGDLRE YVRHVRTLRA ARETSARSFV AGLRYPLAHK QPIWIGSPTV IEGHERIEFA DGAALRIGLA PFGLTTKHDV SILRVHPEGR VRCEGVVSLQ RGIRVVVDSG VLELGPFANI NGFAKILVRE RVRIGAYCNV SWDTQLLDND FHPMVVDGVE KPMSGPIVLE DRAWIGARAI VLKGVTVGES AVVATGAVVT KDVPPKAVVA GSPAKIVGHI DYWR
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