Gene Franean1_5884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5884 
Symbol 
ID5674207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7141282 
End bp7141956 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID641244734 
Productputative acetyltransferase 
Protein accessionYP_001510136 
Protein GI158317628 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.286625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGACGT TCAGAGGTGA TCTACGGGAG TATGTGCGCC ATGTGCGGAC TCTGCGGGCG 
GCGCGGGAGA CCTCGGCCCG TTCGTTCGTG GCCGGTCTTC GGTATCCACT CGCGCACAAG
CAGCCGATCT GGATCGGTTC ACCGACAGTG ATCGAGGGTC ACGAGCGGAT CGAGTTCGCC
GACGGCGCCG CGCTGCGGAT CGGGCTCGCT CCGTTCGGGC TCACCACCAA GCACGACGTG
TCGATCCTGC GCGTGCACCC GGAGGGCCGG GTGCGCTGCG AGGGCGTCGT CTCGCTGCAG
CGCGGGATCC GCGTCGTGGT CGACTCGGGG GTGCTCGAGC TCGGCCCGTT CGCCAACATC
AACGGCTTCG CGAAGATCCT CGTCCGGGAA CGGGTGAGGA TCGGCGCGTA CTGCAACGTG
TCGTGGGACA CCCAGCTGCT CGACAACGAC TTCCACCCGA TGGTCGTGGA CGGCGTGGAA
AAGCCCATGA GCGGGCCGAT CGTGCTGGAG GACCGGGCCT GGATCGGTGC CAGGGCGATC
GTCCTGAAGG GTGTGACCGT CGGGGAGAGC GCCGTCGTCG CCACCGGTGC CGTGGTGACG
AAGGACGTCC CGCCCAAGGC GGTAGTGGCC GGCTCACCGG CGAAGATCGT CGGGCACATC
GACTACTGGC GCTGA
 
Protein sequence
MGTFRGDLRE YVRHVRTLRA ARETSARSFV AGLRYPLAHK QPIWIGSPTV IEGHERIEFA 
DGAALRIGLA PFGLTTKHDV SILRVHPEGR VRCEGVVSLQ RGIRVVVDSG VLELGPFANI
NGFAKILVRE RVRIGAYCNV SWDTQLLDND FHPMVVDGVE KPMSGPIVLE DRAWIGARAI
VLKGVTVGES AVVATGAVVT KDVPPKAVVA GSPAKIVGHI DYWR