Gene Franean1_5881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5881 
Symbol 
ID5674204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7138127 
End bp7138840 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID641244731 
Productmethyltransferase type 11 
Protein accessionYP_001510133 
Protein GI158317625 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.674007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCC TACGTGACGA CGCCCTGGCC TACGCCGGTC ACCAGGTGCA TGTCATGCGC 
CGCCGCGAGG TCGGGACCCT GCTCTCCTGG GCGGGCGACC TGCACGGACG GACCATGCTC
GACGTCGCCG GCGGCGACGG CTACTGGGCC GGCCAGGCGG TCCGCCGCGG CGCCCGCGCC
GTCAGCCTGG ACCTCGCCCG CCACAAGCTG GACTTCGGCA GCCGCCTGAA GCACCGGCCC
AGCCTCGTCG AGGGCGACGC GCTGCGCCTG CCGTTCGCGC CCGCCACCTT CGACATCGTC
ATGTCGGTCT GCGCGATCGA GCACTTCGAC GACGGCCCCG CCGCACTCGC CGAGATGGCC
CGCGTGCTGC GCCCCGGCGG CGACCTGGTG ATGTCCGCGG ACGCCCTGAC CCGGGCCGAC
CGCTGGCCGG ACCTGTTCGC CAGCCACCGC GAGCGCTACC ACGTGCAGCA CACCTATCCG
GGTGAGCAGC TCACGAAGCT GCTCGCCGAC GCCGGGCTCG AGGTGGTCCG CCAGACCTAC
ATGTTCCGGT CCGAGCGGGC GGAGCGCCTC TACCTCAACC TGTCCGCCAA GGGCGGGCGC
ATCGGCTGGA ACGCGGCCGC GGTCTTCTCC CCGCTGGTCG CCCTCTCCGA CCGCCGTGCC
CCCGACACCA CGGGCAGCGT CGTGCTGACC CACGCCCGCA AGCGGCAGCC CTGA
 
Protein sequence
MSSLRDDALA YAGHQVHVMR RREVGTLLSW AGDLHGRTML DVAGGDGYWA GQAVRRGARA 
VSLDLARHKL DFGSRLKHRP SLVEGDALRL PFAPATFDIV MSVCAIEHFD DGPAALAEMA
RVLRPGGDLV MSADALTRAD RWPDLFASHR ERYHVQHTYP GEQLTKLLAD AGLEVVRQTY
MFRSERAERL YLNLSAKGGR IGWNAAAVFS PLVALSDRRA PDTTGSVVLT HARKRQP