| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5876 |
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| Symbol | |
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| ID | 5674199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7133234 |
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| End bp | 7134307 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244726 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001510128 |
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| Protein GI | 158317620 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.624445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.732322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAG TGATGCTGGT CGGCGGGCAG GGAACCCGTC TTCGCCCGTT GACGATGTCG
GCGCCGAAGC CGATGTTGCC GGTCGCCGGC GTGCCGGTGA CGGCCCACAT GCTCGCCCGT
GCCCGCGACG CGGGAATCAC CCGGGTGGTC CTCGCCACCT CGTACCGGGC CGAGGTCTTC
GAGGAGCACT TCGGTGACGG TTCCGGGCAC GGTCTCGAAC TCGAATACGT CACCGAGACC
GAGCCGCTGG GTACCGGCGG CGCCATCCGC AACGTCGCCA GCCGGCTGCG CTCCGGCGCC
GACGAGCCGG TGGTCATCTT CAACGGCGAC ATCCTCTCCG GCCTCGACAT CGGCGCCCTC
GTCGAGCGGC ACACCACCGC CGACGCGGCC GTCACCCTCC ACCTCACCAG GGTCGACGAC
CCGCGGGCCT TCGGTGTCGT CCCGACCGAC CCCGCCGGCC GGGTCACCGC CTTCCTCGAG
AAGACCCCCG ATCCCCCCAC CAACCTCATC AACGCCGGCT GCTACGTCTT CCGCCGCTCG
CTCATCGACA CCATCCCCGC GGGACGTCCG GTCTCGGTCG AGCGGGAGAC CTTCCCGTCC
CTGCTCGCCG CCGGGGTGCC GGTGGTCGGC TACCCGGACG ACACCTACTG GCTCGACCTC
GGGACCCCGG CGGCGTTCGT CCTGGGCTCG CGGGACCTCG TCACCGGGCG GATGCCGTCC
TCGGCGCTGC CCGGCCCGGT CGGGGACCGC CTCGTGCTGC CCGGGTCCAC GGTGGCCACC
GACGCCAAGA TCGGCGGCGG CTCGACGATC GGGGCGGGTG CCTCGGTCGG CACCGGCGCG
CGCATCGATG GCTCGGTGCT GTTCGACCGG GCGTCCGTCG GGGCGGGCGC GTACGTGCGT
GACAGCGTCG TCGGCCGCGA GGCGGTGATC GGCAACGGGG TGGTGCTCGA GAACGTCGTC
ATCGGCGACG GCGCCGTGAT CGAGCCGGGC AACGAGCTGC GCGCCGGGGC CAGGGTGTTC
CCGGGCGCGG TGCTCGGCGC CGGCGCCGTC CGGTTCAGCT CCGACCGGGC CTGA
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| Protein sequence | MDAVMLVGGQ GTRLRPLTMS APKPMLPVAG VPVTAHMLAR ARDAGITRVV LATSYRAEVF
EEHFGDGSGH GLELEYVTET EPLGTGGAIR NVASRLRSGA DEPVVIFNGD ILSGLDIGAL
VERHTTADAA VTLHLTRVDD PRAFGVVPTD PAGRVTAFLE KTPDPPTNLI NAGCYVFRRS
LIDTIPAGRP VSVERETFPS LLAAGVPVVG YPDDTYWLDL GTPAAFVLGS RDLVTGRMPS
SALPGPVGDR LVLPGSTVAT DAKIGGGSTI GAGASVGTGA RIDGSVLFDR ASVGAGAYVR
DSVVGREAVI GNGVVLENVV IGDGAVIEPG NELRAGARVF PGAVLGAGAV RFSSDRA
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