Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5874 |
Symbol | |
ID | 5674197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7129782 |
End bp | 7130573 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244724 |
Product | hypothetical protein |
Protein accession | YP_001510126 |
Protein GI | 158317618 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.030306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.458268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA TCCCGACCAC CTGGCGGACG GCCGGCCGCG ACGGGAACGG AGACGGGCGC AAGGACCCGC ACAACATCTA CGACGCCACC GTGGCCGCGG GCTACTACCT CTGCGCCCAC GGCCGGGACC TGGCCGACCC CGACCAGCTC CGCTCGGCGA TCCTCGCCTA CAACCCGTCG GACGCCTACG TCCGCACCGT CCTGACCTAC CTGAACGGCT ACCGGCAGGG CGGCGAACCG TCCAGCCCGC CGGGCACGCC TCCGCCCACG GCGACGCCGA GCCCGACGCC GCCACCGCCG GCGGGGTGCG AGCCACTGCG CGCGGCCGAC CTCACTGTCA CTCTCACGGA CCTCGATCCC GATGTCGCGG GCTACGAGTC GCTCGATCTC GCCACGACCC GCACGCCGTG GACGGACGTC GACGTCACCG TCGAGACGGA GGCGGACACG ACGGCCGGCA CGGCGATCAC GACGAGCCGG CGGACCGTGC CGGCCGGCAG TGGGAGCACC GCACCGGCGC TGCTGGCGCG GATCCCCGGT CCCAGCCTCG CCGTCGCCAA GCTGGCGGAC GACAGCATCG TGCTCACCCT CACCGTCGAG CCCGCGGACG GGGCCTGTCC CGCGGTCGTG CGCCTGCGCA TCCGCAACGT CCACCCGGAC TCGTTCGCCC CGCCGGCCGC CCCGCCACCG ACCAGCGCGC CGCCGGCTGG CGCGCCATCC ACCGCACCGC CCCCGAGCAC CGTGCCGCTG GACAGCACGC CGTCGAGCAC GGTCCCGACA AGCGCCATGT AG
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Protein sequence | MQFIPTTWRT AGRDGNGDGR KDPHNIYDAT VAAGYYLCAH GRDLADPDQL RSAILAYNPS DAYVRTVLTY LNGYRQGGEP SSPPGTPPPT ATPSPTPPPP AGCEPLRAAD LTVTLTDLDP DVAGYESLDL ATTRTPWTDV DVTVETEADT TAGTAITTSR RTVPAGSGST APALLARIPG PSLAVAKLAD DSIVLTLTVE PADGACPAVV RLRIRNVHPD SFAPPAAPPP TSAPPAGAPS TAPPPSTVPL DSTPSSTVPT SAM
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