| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5871 |
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| Symbol | |
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| ID | 5674194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7124992 |
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| End bp | 7126206 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244721 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001510123 |
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| Protein GI | 158317615 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.24159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACGCG ACGTACTCGC CGACGCGACG GGCTGGGCCG CCCGGTACGT GCCGAAGCCC
ACCGCCGGCG CCCAGCAGGT GCTGACAGGC CTGCTGCTGG AAGCCACCAT GCCGACACCG
GACCAGGCCG GCGACCAGGC CGGCGACCAG GCGACGGATC AGACGACGGA GCAGGCACGG
ACGCAGGCGC CGGGCCCGGC GCTCACCGTC TCCGCGTTCG ACTCCGAGGT CGCCGCGCGG
GCCCCGGTCG AGGCCGTCGT CACCGAGCCC GGGCGGGTCG TCGTGCCCGG GCGGCTGCTG
GCGGATGTCG TGCGCAACCT GCCCGACGCG CCGGTGGTCG TCGAGGCCAC CGAGACCAGG
GTGATCATCG AGTGCGGGGC GGCCCGGTTC CGCATCCCGG CGCTCGCCGC CGAGGACTAC
CCGGTGCTGC CCGCGTTCCC GCCGCCGGTC GGCGAGGTGG ACACGCTCGG CTTCGCCGCG
GCGGTCGCGC AGGTGGCCCC GGCCGCCGGC CGGGACGACG CGCTGCCGGT GCTCACCGCC
GTCCGGCTCG AGATCGCCCG GGGCGGGCTG ACGATGGTCG CCACCGACCG GTACCGGCTC
GCCGTCCGGA CGATCCCGTG GCAGCCCACC GTCGACGAGC CGGACGCGGT CGCGCACGTG
CCGGCCCGGC TGCTCGCCGA CATGGCGAAG CTGCCGACCA CCGCGTCCCG GGTCGCGCTC
GGGATGGGCG TCGACGAGGC CGGGGTCCTG CGTTTCGGGC TGTCCGTGAA CGGCCGGCAG
ACGATCGTCC GGCTGCTGGA GGGGAGCTTC CCGAACTACC GCCGGCTGCT GCCGGAGACG
TCGGAGCTCA CCGTCACGGC GCCGACGGCG GTGCTCGCGG CGGCCGTCCG CCGGGTCGCG
CTGGTGGCGA CGCGCACGGC GCCGCTGCGG TTCACGTTCT CCGCCGGCCA GGTCGTGGCC
GAGGCGGGGG ACGGCGGGGG CGCCCAGGCG TCCGAGCTGG TGCCCGTGGA GTACGACGGC
CCGGAGCTGT CGGTGCTGTT CAACCCCGCG TTCCTGCTGG ACGGCCTAGC GGCGGTCGAG
GGCGACGAGG CCATCATCGG GTTCGCCACC GCCGACCCGG AGATCGCCTC GAGCAAGCCG
GCGGTCCTCA CCGGCAAGGA TGACGGTGAG GACTACCGCT ACCTGCTCAT GCCGATCCGC
ACCGGCACCG CCTGA
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| Protein sequence | MERDVLADAT GWAARYVPKP TAGAQQVLTG LLLEATMPTP DQAGDQAGDQ ATDQTTEQAR
TQAPGPALTV SAFDSEVAAR APVEAVVTEP GRVVVPGRLL ADVVRNLPDA PVVVEATETR
VIIECGAARF RIPALAAEDY PVLPAFPPPV GEVDTLGFAA AVAQVAPAAG RDDALPVLTA
VRLEIARGGL TMVATDRYRL AVRTIPWQPT VDEPDAVAHV PARLLADMAK LPTTASRVAL
GMGVDEAGVL RFGLSVNGRQ TIVRLLEGSF PNYRRLLPET SELTVTAPTA VLAAAVRRVA
LVATRTAPLR FTFSAGQVVA EAGDGGGAQA SELVPVEYDG PELSVLFNPA FLLDGLAAVE
GDEAIIGFAT ADPEIASSKP AVLTGKDDGE DYRYLLMPIR TGTA
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