| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5864 |
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| Symbol | |
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| ID | 5674187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7115991 |
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| End bp | 7116632 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244714 |
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| Product | transcription factor WhiB |
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| Protein accession | YP_001510116 |
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| Protein GI | 158317608 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0507295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.151599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCACA CCGACGCGGG CGTCCACACC GTCCTGGCGG ACGTCGAGCG TCCCGCTGAG
CACGACACGG GTCCGGTCGG GGAGTCAGGG CCCGTGGCAC GTCCGCTGCC CGTTCCCGTT
CCCGGGCCGC CGGCACTCGC GGCCGGAGCG GTGCACCCGC GCCCGGCTGC GGCGTCCGCC
ATGGCGGTCG CGCCGCCGGT CATGCCCGGG CGGGGCCGGC CCGAGCTCGT CGAGACCGGA
TACGACTCCG CGACCGACGA CCTCGACGAC GATGTGGACG ACGAGGGCGA CGAGGACGAG
GACGAGGCGC GGGACGGCGC GTTGGTCGGC CCCGGGGGCG TCACCCTGCC CCGCGGCGAC
GGCTCGCTGT CCGACTCCCT CGCCCAGGTG ATCGACATCG GCTTCGGCGA CCTGCTCGGC
GAGGCGATGG AATGGCAGGA ACGGGCGCTG TGCGCGCAGA CCGACCCGGA GGCGTTCTTC
CCTGAGAAGG GCGGGTCGAC CCGGGAGGCG AAGCGCATCT GTTCGGGCTG CGAGGTGCGG
GTCGAGTGCC TCGAGTACGC GCTGGAGAAC GACGAGCGGT TCGGGATCTG GGGCGGCATG
TCCGAGCGGG AACGGCGCAA GCAGCGCCGC CGGGCAGTCT GA
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| Protein sequence | MEHTDAGVHT VLADVERPAE HDTGPVGESG PVARPLPVPV PGPPALAAGA VHPRPAAASA
MAVAPPVMPG RGRPELVETG YDSATDDLDD DVDDEGDEDE DEARDGALVG PGGVTLPRGD
GSLSDSLAQV IDIGFGDLLG EAMEWQERAL CAQTDPEAFF PEKGGSTREA KRICSGCEVR
VECLEYALEN DERFGIWGGM SERERRKQRR RAV
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