Gene Franean1_5855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5855 
Symbol 
ID5674178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7104955 
End bp7105533 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content64% 
IMG OID641244705 
Productchitin-binding domain-containing protein 
Protein accessionYP_001510107 
Protein GI158317599 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.78659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.147977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG TAGAGCGCGG TACGCGCCAT GGCCTGATTA CCGACCCGCC CTGCCGTTCC 
CAAATCCTGG AGGCGTGGCA GGCAGCCGGA CTGGAATCCG GGAAGTTCTT TCCTGCCACG
CAGGCCGGAC TCCGGGACCC GTACGCCCCG GACGACGTGA CGAGCAGCCA ACCGCCCGCG
GACGGCAAAA TCGCCAGCGC GGGCCATGAT TTCGCCGCCA TACTGGACGA CCCGGGCCGC
AACTGGGCGA AGCACCCGGT GAAGGCGGGC CAGGAACTAA CCGTCACCTG GCATTACCAC
ACCGCGCACA AGACCCGACG ATGGAACTAT TTCATCACCC GGGACGGGTG GGATCCGAAT
GCCCCGCTAA CCCGCGACCA GTTCGAATCA GAACCCTTCC ACCAGGTCCA GAACCCGGGA
CAGCCCTACT GGTCAAGCGA TGATCTGATC CCGCTGGATC CGACCATGCA CACGTTGCCG
CTGCCCAACC GCCGCGGCTA TCACGCGGTG CTGGCCGTGT GGGAGGTAGC CGACACCGGA
AATGCCTTCT ATCAGGTCAT GGACCTTAGT TTCTCCTGA
 
Protein sequence
MTEVERGTRH GLITDPPCRS QILEAWQAAG LESGKFFPAT QAGLRDPYAP DDVTSSQPPA 
DGKIASAGHD FAAILDDPGR NWAKHPVKAG QELTVTWHYH TAHKTRRWNY FITRDGWDPN
APLTRDQFES EPFHQVQNPG QPYWSSDDLI PLDPTMHTLP LPNRRGYHAV LAVWEVADTG
NAFYQVMDLS FS