Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5851 |
Symbol | |
ID | 5674174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7098608 |
End bp | 7099012 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641244701 |
Product | transposase IS200-family protein |
Protein accession | YP_001510103 |
Protein GI | 158317595 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.626877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGCGG GTGGCGTCTA CGACCTCGGG TATCGCATCG TGTGGTGCCC GAAGTACCGC CGCCCCGTGT TCGCTGGTTC TGTCCGTGAC CGCTGTGAGG AGCTGGTCCG GCGGAAGTGC ACCGAGCACG AGTGGATGGT CGTCGCGTGG GAGGTCACGC CCGACCACGT GCGGCTGTTC GTCAAGGCTC ATCCGAAGCA CTTCCCGTCG TGTGTCGCCA ACCCGCTCAA GGGGTTGACG TCCCGGGTGC TGCGCGTGGA GTTCGGGCAT CTGCGTTCCC GGTTGCCGGC CCTGTGGTCG CGGTCGTACT TCGCCGGCGC CGTCGGCGCG GTTTCGCCCG AGACCGTCCG CCGGTACGTT GACACCCGGT ACGGGCGGCT GTGGCGTGTG GAGCGTGCCC GGTGA
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Protein sequence | MGAGGVYDLG YRIVWCPKYR RPVFAGSVRD RCEELVRRKC TEHEWMVVAW EVTPDHVRLF VKAHPKHFPS CVANPLKGLT SRVLRVEFGH LRSRLPALWS RSYFAGAVGA VSPETVRRYV DTRYGRLWRV ERAR
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