Gene Franean1_5851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5851 
Symbol 
ID5674174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7098608 
End bp7099012 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content69% 
IMG OID641244701 
Producttransposase IS200-family protein 
Protein accessionYP_001510103 
Protein GI158317595 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.626877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCGG GTGGCGTCTA CGACCTCGGG TATCGCATCG TGTGGTGCCC GAAGTACCGC 
CGCCCCGTGT TCGCTGGTTC TGTCCGTGAC CGCTGTGAGG AGCTGGTCCG GCGGAAGTGC
ACCGAGCACG AGTGGATGGT CGTCGCGTGG GAGGTCACGC CCGACCACGT GCGGCTGTTC
GTCAAGGCTC ATCCGAAGCA CTTCCCGTCG TGTGTCGCCA ACCCGCTCAA GGGGTTGACG
TCCCGGGTGC TGCGCGTGGA GTTCGGGCAT CTGCGTTCCC GGTTGCCGGC CCTGTGGTCG
CGGTCGTACT TCGCCGGCGC CGTCGGCGCG GTTTCGCCCG AGACCGTCCG CCGGTACGTT
GACACCCGGT ACGGGCGGCT GTGGCGTGTG GAGCGTGCCC GGTGA
 
Protein sequence
MGAGGVYDLG YRIVWCPKYR RPVFAGSVRD RCEELVRRKC TEHEWMVVAW EVTPDHVRLF 
VKAHPKHFPS CVANPLKGLT SRVLRVEFGH LRSRLPALWS RSYFAGAVGA VSPETVRRYV
DTRYGRLWRV ERAR