Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5847 |
Symbol | |
ID | 5674170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7093113 |
End bp | 7094411 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641244697 |
Product | hypothetical protein |
Protein accession | YP_001510099 |
Protein GI | 158317591 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.426804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGATCA CCGGCCGCGC CGTGGCGCTG GTCGCGCTCG GCATCGTCGT GGTGGCTCTC TCCCCGGTGC CAGGCGCGAC CTTCGTGCTG GTGAACCTGC TGGTCGTCGC GCTGATCTGC GTCGACGTGT GGCTGGCGGG GCAGGTGCGC GCGTGCACGT TCGCCCGCTC CGGGCCGACC GCGGCCCGGC TGGGTCAGCC GGTTCCGCTC GTGCTGACCG TCACCAACAA CGGAACCCGC ACCGTGCGGG CCCGCATCCG CGACGGCTGG CCGCCGTCCG CCGGCGCCCG ACCGCGGGTG CACCGGGTGA CGGTGCCGGC GGGCGAGCGC CGGTTCCTGG AGACCACGCT GAACCCGACC CGGCGCGGTG ACCGGATGCC CGTCCGCATC ACCGTGCGCT CGCTGGGCCC GCTGGGCCTG GCCGGGCGGC AGGGCCGGCA CCACTGCCCG TGGCGGGTGC GGGTGCTGCC GCCGTTCTCG TCCCGCCAGC ACCTGCCGGC CGCGCTGGCC CGGTTGCGCG AGGTGGAGGG CGAGGTCGCG ATCCGCGGCG GCGGCGCCGG CTCGGAGTTC GACAGCCTGC GGGAGTACGT CGTCGGCGAC GACGTGCGGA CGATCGACTG GCGGGCCACC GCCCGCCACC ACGGCTCGGT GGTCGTCCGC ACCTTCCGGC CCGAACGGGA CCGCCGGGTC ATCTGCGTCC TCGACACCGG CCGGACGTCA GCCGGCCGGG TCGGCGACGT CCCCCGGCTG GACCACGCGT TGGACGCCGC ACTGCTGCTC ACCGCCGTCG CCCTGCGGGC CGGGGACCGG GTCGGGCTGG TCGCCCACGA CAGCACCAGC CGGATCTCCC TGCCGACCTC ACGGGACAAC GGCCTGCTGG CCCGGATGAG CGATGCGATG GCCACCCTGG AACCGGCCCT CGTCGAGGCC GACCACGCCG GGATGGCCTC GGCGGTGCTG CGCAACGCCT CCCGGCGTGC CCTCGTTGTC ATCTTCACCG AGCTTGTTCC GGCGGTGATC GAGGACGGCC TGCTGCCGGC GCTGCCCACG CTGACCTCCC GGCACACGGT TCTCGTGGCC GCGCTGCGCG ACCCCCGGCT TGACGAGCTC ACAGCCGGGC ACGGCGACGT CCACCAGGTG TACGCGGCGG CGGCAGCCGA GCAGACGCTG CTGCGGCGGC GCGAGCTGAC CGAGGCGCTG CGCCGCCGCG GCGTCGAGGT GGTGGACGTG GCACCGGCGC ACTACGCGGC GCTGGTCACC GACACCTACC TCACGCTGAA GGCCCGCGGA CGCCTGTGA
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Protein sequence | MAITGRAVAL VALGIVVVAL SPVPGATFVL VNLLVVALIC VDVWLAGQVR ACTFARSGPT AARLGQPVPL VLTVTNNGTR TVRARIRDGW PPSAGARPRV HRVTVPAGER RFLETTLNPT RRGDRMPVRI TVRSLGPLGL AGRQGRHHCP WRVRVLPPFS SRQHLPAALA RLREVEGEVA IRGGGAGSEF DSLREYVVGD DVRTIDWRAT ARHHGSVVVR TFRPERDRRV ICVLDTGRTS AGRVGDVPRL DHALDAALLL TAVALRAGDR VGLVAHDSTS RISLPTSRDN GLLARMSDAM ATLEPALVEA DHAGMASAVL RNASRRALVV IFTELVPAVI EDGLLPALPT LTSRHTVLVA ALRDPRLDEL TAGHGDVHQV YAAAAAEQTL LRRRELTEAL RRRGVEVVDV APAHYAALVT DTYLTLKARG RL
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