| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5841 |
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| Symbol | |
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| ID | 5674164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7085950 |
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| End bp | 7086729 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244691 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001510093 |
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| Protein GI | 158317585 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0448793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.386717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATCG TGGTCAAGGG CAGGCACACC GCGGTTCCGG AACGGTTCCG CAGGCATGTC
CAGGCCAAAC TCGCGAAGCT CGAGCGGCTC GACTCCAAGG TCATGCTGGT CGACGTCGAA
CTCTCCAAGG AACACAACCC TCGGCTGTCG GACACCTGCG ACCGTGTCGA GCTCACCGTG
TATTCGCGGG GCCCGGTGAT CCGTGCGGAG GCCGCCGCGG CCGACGCCTA CGCCGCGCTC
GATCGCGCTA CCGCCAAGCT GGCGGAGCGC CTGCGCCGCG CTTCGGACCG GCGGGTCCGC
CACCACGCCA ACCACGCGGG TGCGAACCAC CCGGTTCCCG GCCGGGCGGG TGCCGTCCCG
GACATCCCCG TCGTCCCGAC CGGCCGCCAG CCGGAGACGG ACACCGCCGG TCCGCCGGTC
CCGGGCGCCG AGGACGGCGC GGCGGGCCTC GCCGCCGTCG GATCCGAGAC CCGCGCGAAG
CGGCCGAGCT GGTCGACGGC CGACGACGGC GACGGCGACG GCGACGATTC CGACTACTCG
CCGATGGTGG TACGCGAGAA GACCCACGCG GCCGCGCCCA TGACGCTCGA CGACGCCCTG
TCGAACATGG AGCTCGTGGG GCACGACTTC TACCTTTTCC TCGATGCCGC TAGCGGCCTG
CCCAGCGTCG TGTACCGCCG ATGCGGCTAC GACTACGGCG TCATCCGGCT CGAGGGAGCG
GCCGGAGACA GCATGATCGG CGCCCGGGAA CGAACGGCGG CGGTCATTTC CGCCGTGTGA
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| Protein sequence | MDIVVKGRHT AVPERFRRHV QAKLAKLERL DSKVMLVDVE LSKEHNPRLS DTCDRVELTV
YSRGPVIRAE AAAADAYAAL DRATAKLAER LRRASDRRVR HHANHAGANH PVPGRAGAVP
DIPVVPTGRQ PETDTAGPPV PGAEDGAAGL AAVGSETRAK RPSWSTADDG DGDGDDSDYS
PMVVREKTHA AAPMTLDDAL SNMELVGHDF YLFLDAASGL PSVVYRRCGY DYGVIRLEGA
AGDSMIGARE RTAAVISAV
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