Gene Franean1_5839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5839 
Symbol 
ID5674162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7084350 
End bp7085000 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content76% 
IMG OID641244689 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001510091 
Protein GI158317583 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0730862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.574858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCG ACACCGGATC CGGTCCCGGC CCCGTCCCCG GCCCCTGGCT GCCCCCTGCG 
CGCCGGCCCG GGCCGGGCGC CGAGCGCGCC GTCCAGCGGA TTCCGCTCGA GCCCGTCGAG
ATCACCGCGG GTGCGCTGCA CCTACGTCCC TGGAAGGCCT CGGACGTCGA CGCCGTGCGC
GGGGCCTGTC AGGATCCCGA GATTCCGCGG TGGACGCGGG TCCCCGTTCC CTACACGAGA
GACCACGCGG AGGACTTCGT CTGCCGGCAG GCGCCGGACG CGTGGGCGAC GGCGACGGGC
ACGCCGCTGG CCGTCGTCGA CGCCACCACC GAAGCGCTCC TGGCGTCGGT GGCCCTGCAG
GACCTGACCG ACGAGGGGGA CGCGGAGATC TCCTACTGGT GCGCCGCCGA CGCCCGCGGC
CAGGGCGTGG CCACCCGGGC GGCGGCGGCG CTGCTGCGTT GGGGGTTCGG CGCTCTTGGG
CTGGAACGCG TCGAGTGGCG CGCGGCGGTC GGAAACCACG CCTCCCGCCG GGTGGCGGAG
AAGCTCGGGT TCACCCTCGA CGGCACGCTG CGCAGCGCGA TCGTCCTGGG GGACGGCGTC
CGCCACGACT GCTGGATCGG CACCCGGCTC GCCACGGACC CGCCCGTCTG A
 
Protein sequence
MRSDTGSGPG PVPGPWLPPA RRPGPGAERA VQRIPLEPVE ITAGALHLRP WKASDVDAVR 
GACQDPEIPR WTRVPVPYTR DHAEDFVCRQ APDAWATATG TPLAVVDATT EALLASVALQ
DLTDEGDAEI SYWCAADARG QGVATRAAAA LLRWGFGALG LERVEWRAAV GNHASRRVAE
KLGFTLDGTL RSAIVLGDGV RHDCWIGTRL ATDPPV