| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5838 |
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| Symbol | |
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| ID | 5674161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7081047 |
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| End bp | 7084103 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641244688 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001510090 |
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| Protein GI | 158317582 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.198512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.737923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTGGCG ATCGAGGGGC TAGCATCTTG GTTGTCGGTG AGCCTCGCCG ACATGCCTGC
CGGAGGAGTT TCGCCGTGGT TCTAGACAAG ATCTTGCGTG CCGGTGAGGG CCGGATTCTG
CGCAAGCTCA AGGCGATCGC CGAGCAGGTG AACCTCATCG AGGACGACTT CACCGGTCTG
ACCGACGCCG AGCTGCGCGG GATGACCGAC GAGTTCCGCC AGCGCCTGGC CAGCGAAGAG
GAAACCCTCG ACTCGTTGCT GCCCGAGGCG TTCGCGACGG TGCGCGAGGC GGCGCGGCGC
ACGCTCGGCC AGCGCCATTT CGACGTCCAG ATCATGGGTG GCGCGGCGCT GCACCTGGGC
AACATCGCCG AGATGAAGAC CGGTGAGGGC AAGACCCTGG TCTCCACGCT GCCGTCCTAC
CTGAACGCCC TGAGCGGCAA CGGCGTCCAC ATCGTCACGG TGAACGACTA CCTGGCCCAG
CGCGACGCCG AGAACATGGG CCGTGTCCAC CGCTTCCTCG GCCTCACGGT CGGTGTCATC
CATCCCCAGA TGCCGCCGTC GGTGCGCCGC CAGCAGTACC GGTGCGACAT CACCTACGGC
ACGAACAACG AGTTCGGGTT CGACTATCTG CGCGACAACA TGTCCTGGAG CGCCGAGGAA
CTGGTCCAGC GCGGCCATCA CTTCGCCGTC GTGGACGAGG TCGACTCCAT CCTCATCGAC
GAGGCCCGCA CGCCCCTGAT CATCAGCGGC CCGGCCGACA ACCCGACCCG CTGGTACACC
GAGTTCTCGC GGATCGCCCC CCTGCTCGAG CGGGACGTCG ACTACGAGGT CGAGGAGGGC
AAGCGGACGG TCTCGATCAG CGAGGTCGGC GTAGAGAAGG TCGAGGACCA GCTCGGCATC
GAGAACCTGT ACGAGTCGGT GAACACCCCC CTCGTCGGTT ACCTCAACAA CGCGCTGAAG
GCCAAGGAGC TCTACAAGCG GGACAAGGAC TATATCGTCA CCGACGGTGA GGTCCTCATT
GTCGACGAGT TCACCGGTCG CGTCCTGCAC GGCCGCCGTT ACAGCGAGGG AATGCACCAG
GCGATCGAGG CCAAGGAGAA GGTCGAGATC AAGCAGGAGA ACCAGACCCT GGCGACGATC
ACTCTCCAGA ACTACTTCCG GCTCTACGAC AAGCTGTCCG GAATGACCGG TACGGCCATG
ACGGAGGCCG CCGAGTTCCA CCAGATCTAC GCCCTCGGCG TGGTGCCGAT CCCGACCAAC
AAGCCGATGG CTCGCACGGA CCAGGCCGAC GTCGTCTACA AGACCGAGAT CGCGAAGTTC
GACGCGGTCG TGGAGGACAT CGCCGAGCGG CACGAGAACG GTCAGCCCGT CCTGGTCGGC
ACGACCAGCG TGGAGAAGTC GGAGTACCTG TCCAAGCAGC TCGCCAAGCG CGGTGTCCGG
CACGAGGTGC TGAACGCCAA ACACCACGAG CGCGAGGCGA TGATCATCGG CGAGGCGGGC
CGGCGCGGCG CGGTCACCGT GGCGACGAAC ATGGCCGGCC GAGGCACCGA CATCATGCTC
GGCGGCAACC CCGAGTTCAT CGCCCAGACG GAGCTTCGCC AGCGCGGCCT GTCTCCGATC
GACACCCCGG ACGACTACGA GGCGGCCTGG CCCGAGGCGC TGGAGAAGGC CCGTGCGTCG
GTCAAGGCCG AGCACGAGGA AGTCGTCAAC GCCGGTGGCC TCTATGTGCT CGGCACCGAG
CGGCACGAGT CCCGCCGGAT CGACAACCAG CTGCGCGGCC GTGCCGGCCG TCAGGGCGAC
CGCGGCGAGT CCCGGTTCTA CCTCTCCCTC GGTGACGACC TCATGCGGTT GTTCAACGCC
GCGGCGGTCG AGGGCATCAT GGACCGCCTC AACATCCCGG ACGACGTCCC GATCGAGTCC
AAGATCGTGA CTCGCGCGAT CCGTTCCGCG CAGACCCAGG TCGAGGGCCA GAACTTCGAG
ATCCGCAAGA ACGTCCTCAA GTACGACGAA GTCATGAACA AGCAGCGCAC CGTGATCTAC
GAGGAGCGCC GCAAGGTCCT GGAGGGCGCC GACCTGCACG AGCAGGTTCG CCACTTCGTT
GATGACACCG TCGAGGGCTA TGTGCGCGGC GCGACGGCCG ACGGGTACCC GGAGGAGTGG
GACCTCGAAA CCCTCTGGTC GGGCCTGGGC CTGCTCTACC CGGTCGGCGT CGACGCACCG
GGCACCGACG ACCGCGAGGG GCTGACCTCC GACCTCCTGC TCGAGGATCT TCAGGCGGAC
GCGCAGGACG CCTACGACCG GCGCGAGGCC GACCTCGGCG ACAAGCCGGA CGGCGAGGCC
GTCATGCGTG AGCTGGAGCG CCGGGTGGTG CTCGCGGTAC TCGACCGCAA GTGGCGTGAG
CACCTCTACG AGATGGACTA CCTGCAGGAG GGCATCGGCC TGCGGGCGAT GGGGCAGCGA
GACCCGGTCG TGGAGTACCA GCGCGAGGGC TTCGACATGT TCCAGACGAT GATGGAGGGC
ATCAAGGAGG AGTCGGTCCG CCTCCTGTTC AACGTCGAGG TGCAGGTAGC GGGGCGGGAC
ACCGACCAGA GCGGCACCGC GCCCGAAGGA GCGCCCGCAG CCCCGGCCGG CACGACGCCC
ACGCCGGCCA CCCCGGCCGA GCGCGGCTCC GTGTCCGTCG GCGCGGTGCC TCTGGTCACC
CCGGCCGCGC CCGCACCGGC GCAGCCCGCG CGGACCGCTC CCGAGCCTCC GCCGGCCCCG
GTGCCGGCGT CCCCGCCGCC CGTCTTCGTC AAGGGCCTCG AACCGCACCG CCCGACCGGT
GGACTGCGTT ACACGGCGCC GTCTGTCGAC GGCGGCTCGT CCACGGTGAC GACCGTCGAC
AACGGGTCCG AGCTGTCCCG TGCCGGCGGT GGTGGGCCGC GCTCGGCCGG CGGCGGCGTG
TCCCGCGGCG CTGGCGAGGG CGGAACGGCC CGCCCGGCAC GCAACGCGCC CTGCCCCTGC
GGCTCGGGGC GGAAGTACAA GCGCTGCCAC GGCGATCCGG CCCGCCGCAA CGACTGA
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| Protein sequence | MGGDRGASIL VVGEPRRHAC RRSFAVVLDK ILRAGEGRIL RKLKAIAEQV NLIEDDFTGL
TDAELRGMTD EFRQRLASEE ETLDSLLPEA FATVREAARR TLGQRHFDVQ IMGGAALHLG
NIAEMKTGEG KTLVSTLPSY LNALSGNGVH IVTVNDYLAQ RDAENMGRVH RFLGLTVGVI
HPQMPPSVRR QQYRCDITYG TNNEFGFDYL RDNMSWSAEE LVQRGHHFAV VDEVDSILID
EARTPLIISG PADNPTRWYT EFSRIAPLLE RDVDYEVEEG KRTVSISEVG VEKVEDQLGI
ENLYESVNTP LVGYLNNALK AKELYKRDKD YIVTDGEVLI VDEFTGRVLH GRRYSEGMHQ
AIEAKEKVEI KQENQTLATI TLQNYFRLYD KLSGMTGTAM TEAAEFHQIY ALGVVPIPTN
KPMARTDQAD VVYKTEIAKF DAVVEDIAER HENGQPVLVG TTSVEKSEYL SKQLAKRGVR
HEVLNAKHHE REAMIIGEAG RRGAVTVATN MAGRGTDIML GGNPEFIAQT ELRQRGLSPI
DTPDDYEAAW PEALEKARAS VKAEHEEVVN AGGLYVLGTE RHESRRIDNQ LRGRAGRQGD
RGESRFYLSL GDDLMRLFNA AAVEGIMDRL NIPDDVPIES KIVTRAIRSA QTQVEGQNFE
IRKNVLKYDE VMNKQRTVIY EERRKVLEGA DLHEQVRHFV DDTVEGYVRG ATADGYPEEW
DLETLWSGLG LLYPVGVDAP GTDDREGLTS DLLLEDLQAD AQDAYDRREA DLGDKPDGEA
VMRELERRVV LAVLDRKWRE HLYEMDYLQE GIGLRAMGQR DPVVEYQREG FDMFQTMMEG
IKEESVRLLF NVEVQVAGRD TDQSGTAPEG APAAPAGTTP TPATPAERGS VSVGAVPLVT
PAAPAPAQPA RTAPEPPPAP VPASPPPVFV KGLEPHRPTG GLRYTAPSVD GGSSTVTTVD
NGSELSRAGG GGPRSAGGGV SRGAGEGGTA RPARNAPCPC GSGRKYKRCH GDPARRND
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