| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5833 |
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| Symbol | |
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| ID | 5674156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7076456 |
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| End bp | 7077232 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244683 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001510085 |
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| Protein GI | 158317577 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.646816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGC TGACCGTCGC GCCGGCGCGA CCGGAGCCGA CCCCGCCGGT GCCGCCGTCA
CCCCCGGCGC GCAGGCTCGG GCGCCGCCGC TGGCGCGACT CGCGGCTGCT GATCGGCGTC
CTGCTGGTGC TGGTGTCCGT CGTCGCCGGC GCGCGCCTGT TCGCGACCGC GGACCGGACC
AGGCAGTGGG TGGTCGCCGC CGCCGACCTG CCGGCCGGCC ACATCGTCGT CGACAGCGAC
CTGACCACGG CCACAGCCCA CCTGGACGGC GCGATGTCGG ACCGCTACTA CCCCGGTGAC
CGCCGCAGCG AACTCCTGGG CGCCACCCTG GCCCGTCCGG TCAGCTCGGG CGAGCTCCTG
AGCGGCGCCG ACTTCGCCGG CGAGGGCGCC GCCGCGACCA GGCTCGTCCC GGTGATCGTC
AAGGCCGGGC GGGTCCCCGA CCTGTCCCCC GGCGATCACG TGGACGTCTT CGTGTACCAG
CCGGGAGCCG CCGCGCCGCC CGAGACAGGC GGCGACCCGG CGCAGCCCGC GCAGGAGGGG
CAGGCCGTGG CCGGCGCGGG CGTCGAGATC CAGGTGCTGC ACGACGTCGA GTTCGTCGCA
CAGGACAGGC TCAACAGCGG CGACCGGTCG CTGTCCCTGC GGGTTCCGGT GGATGACGCC
ATCCGGGCGG TGGCGGCGTC GCAGAGCGAG CGGGTCGACG TCGTGAAGCT GGAGCGGGAC
GCCCGCGGCG AGGTCGGATC GGGCGGCCCG TCCTCCGCTC CGGGGTACGG TCGGTGA
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| Protein sequence | MTELTVAPAR PEPTPPVPPS PPARRLGRRR WRDSRLLIGV LLVLVSVVAG ARLFATADRT
RQWVVAAADL PAGHIVVDSD LTTATAHLDG AMSDRYYPGD RRSELLGATL ARPVSSGELL
SGADFAGEGA AATRLVPVIV KAGRVPDLSP GDHVDVFVYQ PGAAAPPETG GDPAQPAQEG
QAVAGAGVEI QVLHDVEFVA QDRLNSGDRS LSLRVPVDDA IRAVAASQSE RVDVVKLERD
ARGEVGSGGP SSAPGYGR
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