| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5824 |
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| Symbol | |
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| ID | 5674147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7064518 |
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| End bp | 7065534 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244674 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001510076 |
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| Protein GI | 158317568 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.993294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGG TGGCCGCAGG CGCGCTGCTC GGGCTCGTCC TGGGCGTCGG TCTCGTCATC
GTGATCTACC GGTCGCCACC CGCGCGGAAG GTGCGGCTGG CCGACCGGCT CGACCCGTAC
CTGCGCGACA CGCCGGTCCC GTCGCGCCTG CTGGCGGATG GCGCCCGGCG CGGCGGGCAC
TCCGCGTCGG ATTCCTCCGG CCCGGCGGGC GGACGTCCCA TCATGGCGGG AGGCACGGCG
GGGCGGTTCG GGCTCGGAGC GGTGGAGGCG CTGGTCCGAC CGTTCGTCGA GGACGCAGCC
CGCCGCCTCG ACGGTTTCCT CGGCGGCCGG GTGGCCCTCA ACCGGCGGCT CGTCCAGGCT
GGTGGGCGCA CCCCCGTCGA GGAGTTCCGG GTGCAGCAGG TGATCTGCGC GGTCGCCGGT
GCCCTGCTCG GCGCCCTCGT CCTGGCGATG CGCACGCTGT TCGGGGTCGG GCCGCCCGCC
CTCGTCGGGA TCGCGCTGGT GGTCGCCGGC GCCGCCGGCG GGATCCTGGC GCGGGACTGG
TGGCTCACCC GGGCGATCCG CGAGCGCGAG GACCGCATGC TCATGGAGTT CCCCACCGTC
GCCGAGCTGC TGGCGCTCGC CGTCACCGCG GGGGAGTCCG CGATCGGCGC GCTGGAGCGG
GTCAGCCGCC TGACCCACGG CGAGCTGGGC ACCGAGCTGC GGCTCGCGCT CGCCGACGCG
CACGCGGGCG CCTCGCTCGT GCAGGCCCTG GAGGGCATCG CCACCCGCAC GTCACTGCCG
CCGCTGGCCA GGTTCGTCGA CGGCATGGCC GTCGCGATCG AGCGCGGCAC GCCCCTGGCG
GACGTCCTGC GGGCGCAGGC GGTGGACGTC CGCGAGGCGG GCAAGCGTCA GCTGCTGGAG
GCGGGCGGGC GCAAGGAGAT CGCGATGATG ATCCCGGTGG TCTTCCTCAT CCTGCCGACG
ACGGTGATCT TCGCCTTCTA CCCGGCACTC GTCAGCTTCA CGGTGATCGC GCAGTGA
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| Protein sequence | MSTVAAGALL GLVLGVGLVI VIYRSPPARK VRLADRLDPY LRDTPVPSRL LADGARRGGH
SASDSSGPAG GRPIMAGGTA GRFGLGAVEA LVRPFVEDAA RRLDGFLGGR VALNRRLVQA
GGRTPVEEFR VQQVICAVAG ALLGALVLAM RTLFGVGPPA LVGIALVVAG AAGGILARDW
WLTRAIRERE DRMLMEFPTV AELLALAVTA GESAIGALER VSRLTHGELG TELRLALADA
HAGASLVQAL EGIATRTSLP PLARFVDGMA VAIERGTPLA DVLRAQAVDV REAGKRQLLE
AGGRKEIAMM IPVVFLILPT TVIFAFYPAL VSFTVIAQ
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