Gene Franean1_5815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5815 
Symbol 
ID5674138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7058106 
End bp7058510 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content72% 
IMG OID641244665 
ProductSecC motif-containing protein 
Protein accessionYP_001510067 
Protein GI158317559 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.636421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG TCGACCAGTG CCCATGCGGC TCCCACCGGG AGTACGCGCA GTGCTGCGAG 
CCTTTCCACC TCGGGAGCCC GGCGCCGACC GCCGAGGCGC TCATGCGATC CCGCTACAGC
GCCTTCGCCC GCGGCCTCGC GCCGTACCTG CTGCGCACCT GGCATCCCTC AACGCGCCCC
GATCGCCTCG ACCTGGACGC CGGTACGACC TGGCGCGCCC TGCAGATCGT CGACACCGTG
AACGGCGGCC CAGACGACGA CACCGGTGTC GTGGAATTCC GCGCGATCGC GCGCTCGGCG
GACGGCGAGC GTCGCGTGCA GCACGAACGC AGCACGTTCA CGCGGATCGA CGGCCGCTGG
CTCTATGTGG ATGCCGGGAC GGGACCGCTG GTCCGCGACC GGTGA
 
Protein sequence
MSVVDQCPCG SHREYAQCCE PFHLGSPAPT AEALMRSRYS AFARGLAPYL LRTWHPSTRP 
DRLDLDAGTT WRALQIVDTV NGGPDDDTGV VEFRAIARSA DGERRVQHER STFTRIDGRW
LYVDAGTGPL VRDR