Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5813 |
Symbol | |
ID | 5674136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7055634 |
End bp | 7056200 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641244663 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001510065 |
Protein GI | 158317557 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.431791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCGC TCCGATACTC GATCAACATC ACCCTCGACG GTTGCTGCGA CCACCGGGTG GGGATCGCGG ACGACGAGTC GCATCGCTAT TGGGCCGCCA GTCTGGAACG AGCCGATGCC CTTCTCCTCG GCCGGGTGAC CTACGAGATG ATGGAGGCTG CGTGGCGGCT GCCGGCGACG GGAACGTGGC CCGACTGGAT GGCTGACTGG ATGGTCCCCT TCGCCCGGAC GATCGACGGG GCGAAGAAGT ACGTCGTGTC GGGCACCCTG GATCGGGTCG ACTGGAACGC GGAGCTCGTG CGGGGTGACC TGAGGAACGC TGTTCAGCAG CTCAAGCAGG AGCCTGGAAG AGGCCTGTTC GTGGGAGGCG TGACCCTCCC GCTGGCCCTG GCGGATCTGG GATTGATCGA TGAGTACGAG TTTGTCGTGC AGCCCATCCT GGCGGGCCAC GGGCCGACGT TGTTCGCCGG CCTGAGCGAA CGGCTCGAGC TGAAGCTCGT GGAGCACCAG GAGTTCCGGT CGGGGGCGCT CGCGCTGCGG TACCAGCCCA GTCGGGTCCC GGCCTGA
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Protein sequence | MRPLRYSINI TLDGCCDHRV GIADDESHRY WAASLERADA LLLGRVTYEM MEAAWRLPAT GTWPDWMADW MVPFARTIDG AKKYVVSGTL DRVDWNAELV RGDLRNAVQQ LKQEPGRGLF VGGVTLPLAL ADLGLIDEYE FVVQPILAGH GPTLFAGLSE RLELKLVEHQ EFRSGALALR YQPSRVPA
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