Gene Franean1_5813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5813 
Symbol 
ID5674136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7055634 
End bp7056200 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID641244663 
Productdeaminase-reductase domain-containing protein 
Protein accessionYP_001510065 
Protein GI158317557 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.431791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGC TCCGATACTC GATCAACATC ACCCTCGACG GTTGCTGCGA CCACCGGGTG 
GGGATCGCGG ACGACGAGTC GCATCGCTAT TGGGCCGCCA GTCTGGAACG AGCCGATGCC
CTTCTCCTCG GCCGGGTGAC CTACGAGATG ATGGAGGCTG CGTGGCGGCT GCCGGCGACG
GGAACGTGGC CCGACTGGAT GGCTGACTGG ATGGTCCCCT TCGCCCGGAC GATCGACGGG
GCGAAGAAGT ACGTCGTGTC GGGCACCCTG GATCGGGTCG ACTGGAACGC GGAGCTCGTG
CGGGGTGACC TGAGGAACGC TGTTCAGCAG CTCAAGCAGG AGCCTGGAAG AGGCCTGTTC
GTGGGAGGCG TGACCCTCCC GCTGGCCCTG GCGGATCTGG GATTGATCGA TGAGTACGAG
TTTGTCGTGC AGCCCATCCT GGCGGGCCAC GGGCCGACGT TGTTCGCCGG CCTGAGCGAA
CGGCTCGAGC TGAAGCTCGT GGAGCACCAG GAGTTCCGGT CGGGGGCGCT CGCGCTGCGG
TACCAGCCCA GTCGGGTCCC GGCCTGA
 
Protein sequence
MRPLRYSINI TLDGCCDHRV GIADDESHRY WAASLERADA LLLGRVTYEM MEAAWRLPAT 
GTWPDWMADW MVPFARTIDG AKKYVVSGTL DRVDWNAELV RGDLRNAVQQ LKQEPGRGLF
VGGVTLPLAL ADLGLIDEYE FVVQPILAGH GPTLFAGLSE RLELKLVEHQ EFRSGALALR
YQPSRVPA