Gene Franean1_5788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5788 
Symbol 
ID5675773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7031181 
End bp7031648 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID641244638 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001510040 
Protein GI158317532 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0683068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.880784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCA AGGAACTGGG ACACCTCGTA CTGTACGTGC GCGAACTCGA ACGCTCCGTT 
GCCTTCTACC GGGACGTCCT CGGCTGGCGG CAGGTCTTCC CCGAGGTTGG CGGGCCGGCC
GGTCTGGGCA TCCCCGCGGC GGCGTTCTCC TCGGGCCGCA CGCACCATGA GCTGCTGCTG
ATCGAGGTCG GGGCGGACGC GGCCGCGCTG CCGCCCGGTC GGCGCGTCGG GCTCTACCAT
TTCGGGCTGA AGGTCGGCGA CAGCGACGAC GAGCTTCGGG AGGCGCTGGA GCGCATCGAG
CGGGCCGGCG TGCGGCTCGT CGGCGCGTCG GACCACACGG TCACCCACAG CCTCTACATC
TCCGACCCGG ACGGGAACGA GATCGAGCTG TACATCGACG TGCCCGGGGT CGACTGGCGC
GGCAACCCCG CCCTGATCGC GGCGCCCATC CATCCGCTCC GCCTCTGA
 
Protein sequence
MEIKELGHLV LYVRELERSV AFYRDVLGWR QVFPEVGGPA GLGIPAAAFS SGRTHHELLL 
IEVGADAAAL PPGRRVGLYH FGLKVGDSDD ELREALERIE RAGVRLVGAS DHTVTHSLYI
SDPDGNEIEL YIDVPGVDWR GNPALIAAPI HPLRL