Gene Franean1_5764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5764 
Symbol 
ID5674090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7002231 
End bp7003229 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID641244617 
Producthypothetical protein 
Protein accessionYP_001510020 
Protein GI158317512 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA CCATTGCTAC GGAAAGCCCG GCCCTTCACG CCATACAAAC CCATACCGCA 
GCCGAGAACC CCAGTTCGTT CCTGGCTGTC GGCAGCCGGA ACGAGGTCTT CACCGCCCCG
GGCACCGACG GCGTCGTCGT CTACCGCCGC ACCGGCCGGT ACCTCGTCCA CTTCGGCGGG
CCGTTCGCCC ACCCGGATTC CTACGAGACA CTGCTGGACC GGTTCACAGC TTTCGCGGCC
GACGAAGGGC TGCGGCTCGT GGGAGTGCAA CTGCAGCGCG CCGACGCGGA GGTCTACGCC
CGGCGCGGCT TTACCGTGAA CCAGGTCGGT GCCTCGTGGG CGGTGAGCCT GCCCGACTTC
ACCCTGCGTG GCACCCGGTT CATGCAGCTA CGCAACAAGA TTTCGCGGGC ACTGCGCAAC
GGCCTCGTGG TCGAGGAGGT CGACGCCGCC CAGTGGTACG ACCACCTGCG CGAGGTCGAC
CAGGCGTGGT TGTCGTCGAA AGGCGAACAC GCCCGTCCGC TCGAGTTCCT GGTGGGCGAG
GTGGGCGGTG CCGAGCAACG CCACCGTCGG CTGTTCGTCG GCACCGTGGC CGGCGCCGTG
GTGGCGTACA TCTCCTACTC GCCGGTGTTC GGCAGTCGCG CGGGATGGAT GCACGACCTG
AGCCGGCGGG TTCCCGGGGG TTCTCCTGGC CTCATGGAAG CCGTCAACGC GGCCGCGATC
GAGACGTTCC GCGCCGAGGG CACGCCGTGG CTGCACTTCG GCTTCACGCC CTTCACGGGG
ATGGACCTCG CGCACGAGCT GCCCGGCCAC AGCCCTGCTT TCCGGTGGCT GGCGGACTTT
CTCTGGGCCG AAGGCGCGGC GATCTACCCG GCGCAGAGTC AGCTGGCCTA CAAGGAGAAG
TGGGCACCCC AGGTCGTGAT CCCCGAGTAC GTCGCCTTCC AGGGCCAGGC CTCGCCGGCG
GCGTTCGCGC ACGTCTTCCG CGCCTGCAAC GCGTTCTGA
 
Protein sequence
MPATIATESP ALHAIQTHTA AENPSSFLAV GSRNEVFTAP GTDGVVVYRR TGRYLVHFGG 
PFAHPDSYET LLDRFTAFAA DEGLRLVGVQ LQRADAEVYA RRGFTVNQVG ASWAVSLPDF
TLRGTRFMQL RNKISRALRN GLVVEEVDAA QWYDHLREVD QAWLSSKGEH ARPLEFLVGE
VGGAEQRHRR LFVGTVAGAV VAYISYSPVF GSRAGWMHDL SRRVPGGSPG LMEAVNAAAI
ETFRAEGTPW LHFGFTPFTG MDLAHELPGH SPAFRWLADF LWAEGAAIYP AQSQLAYKEK
WAPQVVIPEY VAFQGQASPA AFAHVFRACN AF