Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5756 |
Symbol | |
ID | 5674082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6994189 |
End bp | 6995229 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641244609 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_001510012 |
Protein GI | 158317504 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGG TCCCGGCCAC GCCGCGCGGG CGGGCGGCGG TGATCGCCGG CGTCGGCGGG TACGTCCCCC CGAACGTCGT CACCAACGAC GACCTCGCTG CCCGCCTCGA CACCTCCGAC GAGTGGATCC GCAGCCGCAC CGGGATCGCC GCACGCAACG TGGTGTCCCC TGGGACGGCG ACGTCGGACC TCGCCGTCGA GGCGGGCCGC CGCGCGTTGG AGTCCGCCGG CGTGGCCGAG GCGGGCGCGG TCGTGCTGGC CACGACCACG CCCGACCGGC CCTGCCCGGC GACGGCGCCC GAGGTCGCGA GCCGCCTCGG GCTCGGTGGC GCGGCCGCGT TCGACATCGC TTCGGTGTGC AGCGGATTCC TCTACGCGCT GGCCGTCGGC GCCGGCCTGA TCGCGACTGG CGTCGCGGAG CGGGTCCTGG TGGTCGGCGC GGACGCCTTC ACGACCATCA TAGACCCGCA GGACCGGGGC ACCGCCGTAA TCTTCGCCGA CGGGGCGGGC GCGGTGGTGC TCCGCGCCGG CGAGCCGACC GAGGCGGGGG TGGTCGGCAC CGTCGTGCTG GGCAGCGACG GTGCCCGCAG CGACCTCATC GAAGTGCCGG GGGGAGGCTC CCGGCACCGC TCGTCCCACG CCGCCACCGG CGACGGCGCC GATCTGGGCG ACCCGTACTT CCGGATGCGG GGACGCGAGA CGTACCGGCA CGCGGTGGAA CGGATGACGT CGGCGTCGCG GCAGGCCGCG GCGGCCGCCG GCTGGGACGT CTCCCGAGAC GTCGACCGCT TCGCCGCACA CCAGGCCAAC GCCCGGATCC TGGCGGCGGT CGCCGACCGG CTCGGTGTCC GCCCGCAGCG ACGGCTGTCC AACATCGAGC AGGTGGGCAA CACCGGCGCC GCCTCCGTCC CGTTGCTGCT GGCCGAGGCG ACGGCCGCCG GGGCGTTGAC GGCCGGGCAC CGACTGCTGC TCACCGCCTT CGGTGGCGGT CTGGCCTGGG GCGCGACGGC GTTGGTGTGG CCAGACGTCA AGGCCGGCTG A
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Protein sequence | MSAVPATPRG RAAVIAGVGG YVPPNVVTND DLAARLDTSD EWIRSRTGIA ARNVVSPGTA TSDLAVEAGR RALESAGVAE AGAVVLATTT PDRPCPATAP EVASRLGLGG AAAFDIASVC SGFLYALAVG AGLIATGVAE RVLVVGADAF TTIIDPQDRG TAVIFADGAG AVVLRAGEPT EAGVVGTVVL GSDGARSDLI EVPGGGSRHR SSHAATGDGA DLGDPYFRMR GRETYRHAVE RMTSASRQAA AAAGWDVSRD VDRFAAHQAN ARILAAVADR LGVRPQRRLS NIEQVGNTGA ASVPLLLAEA TAAGALTAGH RLLLTAFGGG LAWGATALVW PDVKAG
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