Gene Franean1_5756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5756 
Symbol 
ID5674082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6994189 
End bp6995229 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content76% 
IMG OID641244609 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001510012 
Protein GI158317504 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG TCCCGGCCAC GCCGCGCGGG CGGGCGGCGG TGATCGCCGG CGTCGGCGGG 
TACGTCCCCC CGAACGTCGT CACCAACGAC GACCTCGCTG CCCGCCTCGA CACCTCCGAC
GAGTGGATCC GCAGCCGCAC CGGGATCGCC GCACGCAACG TGGTGTCCCC TGGGACGGCG
ACGTCGGACC TCGCCGTCGA GGCGGGCCGC CGCGCGTTGG AGTCCGCCGG CGTGGCCGAG
GCGGGCGCGG TCGTGCTGGC CACGACCACG CCCGACCGGC CCTGCCCGGC GACGGCGCCC
GAGGTCGCGA GCCGCCTCGG GCTCGGTGGC GCGGCCGCGT TCGACATCGC TTCGGTGTGC
AGCGGATTCC TCTACGCGCT GGCCGTCGGC GCCGGCCTGA TCGCGACTGG CGTCGCGGAG
CGGGTCCTGG TGGTCGGCGC GGACGCCTTC ACGACCATCA TAGACCCGCA GGACCGGGGC
ACCGCCGTAA TCTTCGCCGA CGGGGCGGGC GCGGTGGTGC TCCGCGCCGG CGAGCCGACC
GAGGCGGGGG TGGTCGGCAC CGTCGTGCTG GGCAGCGACG GTGCCCGCAG CGACCTCATC
GAAGTGCCGG GGGGAGGCTC CCGGCACCGC TCGTCCCACG CCGCCACCGG CGACGGCGCC
GATCTGGGCG ACCCGTACTT CCGGATGCGG GGACGCGAGA CGTACCGGCA CGCGGTGGAA
CGGATGACGT CGGCGTCGCG GCAGGCCGCG GCGGCCGCCG GCTGGGACGT CTCCCGAGAC
GTCGACCGCT TCGCCGCACA CCAGGCCAAC GCCCGGATCC TGGCGGCGGT CGCCGACCGG
CTCGGTGTCC GCCCGCAGCG ACGGCTGTCC AACATCGAGC AGGTGGGCAA CACCGGCGCC
GCCTCCGTCC CGTTGCTGCT GGCCGAGGCG ACGGCCGCCG GGGCGTTGAC GGCCGGGCAC
CGACTGCTGC TCACCGCCTT CGGTGGCGGT CTGGCCTGGG GCGCGACGGC GTTGGTGTGG
CCAGACGTCA AGGCCGGCTG A
 
Protein sequence
MSAVPATPRG RAAVIAGVGG YVPPNVVTND DLAARLDTSD EWIRSRTGIA ARNVVSPGTA 
TSDLAVEAGR RALESAGVAE AGAVVLATTT PDRPCPATAP EVASRLGLGG AAAFDIASVC
SGFLYALAVG AGLIATGVAE RVLVVGADAF TTIIDPQDRG TAVIFADGAG AVVLRAGEPT
EAGVVGTVVL GSDGARSDLI EVPGGGSRHR SSHAATGDGA DLGDPYFRMR GRETYRHAVE
RMTSASRQAA AAAGWDVSRD VDRFAAHQAN ARILAAVADR LGVRPQRRLS NIEQVGNTGA
ASVPLLLAEA TAAGALTAGH RLLLTAFGGG LAWGATALVW PDVKAG